RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GPR25O00155 361 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TBC1D8O95759 1140 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 EGFRP00533 1210 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GPTP24298 496 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GNAI1P63096 354 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 PARP10Q53GL7 1025 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 ZNF34Q8IZ26 560 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 CDCA5Q96FF9 252 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 ZNF521Q96K83 1311 aa11.25□□□□□ -0.61
PDLIM1P3-201ENST00000582370 PSMD14O00487 310 aa11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 CT47B1P0C2W7 299 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 ZNF609O15014 1411 aa11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TRIOBPQ9H2D6 2365 aa11.24□□□□□ -0.61
PDLIM1P3-201ENST00000582370 CEP290O15078 2479 aa11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 FKTNO75072 461 aa11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 SLC10A5Q5PT55 438 aa11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 ZNF428Q96B54 188 aa11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TM4SF4P48230 202 aa11.22□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GRAPQ13588 217 aa11.22□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P3-201ENST00000582370 NEUROD2Q15784 382 aa11.22□□□□□ -0.61
PDLIM1P3-201ENST00000582370 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P3-201ENST00000582370 CACNA1FO60840 1977 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 DLL1O00548 723 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 SREBF2Q12772 1141 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 MCM10Q7L590 875 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 DBNDD1Q9H9R9 158 aa11.21□□□□□ -0.61
PDLIM1P3-201ENST00000582370 RTL9Q8NET4 1388 aa11.2□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
PDLIM1P3-201ENST00000582370 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1P3-201ENST00000582370 RRP7AQ9Y3A4 280 aaKnown RBP11.2□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ECE2O60344 883 aa11.19□□□□□ -0.62
PDLIM1P3-201ENST00000582370 SLFN5Q08AF3 891 aa11.19□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
PDLIM1P3-201ENST00000582370 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ASTN2O75129 1339 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 CHL1O00533 1208 aa11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 HOXB7P09629 217 aa11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 MYL6BP14649 208 aa11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 EYA3Q99504 573 aa11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 TRIM17Q9Y577 477 aa11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ZNF646O15015 1829 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1P3-201ENST00000582370 RANBP2P49792 3224 aaKnown RBP11.17□□□□□ -0.62
PDLIM1P3-201ENST00000582370 COL6A3P12111 3177 aa11.17□□□□□ -0.62
PDLIM1P3-201ENST00000582370 VIL1P09327 827 aaKnown RBP11.17□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ZNF853P0CG23 659 aa11.17□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ZNF280AP59817 542 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1P3-201ENST00000582370 OTOP1Q7RTM1 612 aa11.17□□□□□ -0.62
PDLIM1P3-201ENST00000582370 UBE2Q2LH0YL09 131 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 RIMBP2O15034 1052 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 SCARF1Q14162 830 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 DCTN1Q14203 1278 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 SLC17A8Q8NDX2 589 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 AGBL3Q8NEM8 1001 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 TSPYL4Q9UJ04 414 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
PDLIM1P3-201ENST00000582370 SH3TC1Q8TE82 1336 aa11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 HCLS1P14317 486 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 EN2P19622 333 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 NF2P35240 595 aa11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 TTLL12Q14166 644 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 R3HDMLQ9H3Y0 253 aa11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 KCNQ5Q9NR82 932 aa11.15□□□□□ -0.62
PDLIM1P3-201ENST00000582370 COL4A1P02462 1669 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 TCIRG1Q13488 830 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 DUSP27Q5VZP5 1158 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 RSBN1LQ6PCB5 846 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 NLRP10Q86W26 655 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 ERO1AQ96HE7 468 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 MYOZ2Q9NPC6 264 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms