RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.25
SKA2-206ENST00000581068 MROH5Q6ZUA9 1318 aa13.52□□□□□ -0.25
SKA2-206ENST00000581068 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.25
SKA2-206ENST00000581068 SOCS7O14512 581 aa13.51□□□□□ -0.25
SKA2-206ENST00000581068 GLRX3O76003 335 aaKnown RBP13.51□□□□□ -0.25
SKA2-206ENST00000581068 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
SKA2-206ENST00000581068 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
SKA2-206ENST00000581068 MMP10P09238 476 aa13.5□□□□□ -0.25
SKA2-206ENST00000581068 SDSP20132 328 aa13.5□□□□□ -0.25
SKA2-206ENST00000581068 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
SKA2-206ENST00000581068 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
SKA2-206ENST00000581068 PI4K2BQ8TCG2 481 aa13.5□□□□□ -0.25
SKA2-206ENST00000581068 A0A1B0GUL7 405 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 CDC45O75419 566 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 PDE8BO95263 885 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 TIMM10P62072 90 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 ATP2B3Q16720 1220 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 RPGRQ92834 1020 aaKnown RBP13.49□□□□□ -0.25
SKA2-206ENST00000581068 UPF1Q92900 1129 aaKnown RBP eCLIP13.49□□□□□ -0.25
SKA2-206ENST00000581068 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
SKA2-206ENST00000581068 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 BSDC1Q9NW68 430 aaPredicted RBP13.49□□□□□ -0.25
SKA2-206ENST00000581068 TLR7Q9NYK1 1049 aaKnown RBP13.49□□□□□ -0.25
SKA2-206ENST00000581068 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
SKA2-206ENST00000581068 LRP5O75197 1615 aa13.49□□□□□ -0.25
SKA2-206ENST00000581068 ZNF609O15014 1411 aa13.48□□□□□ -0.25
SKA2-206ENST00000581068 KLRG2A4D1S0 409 aaPredicted RBP13.48□□□□□ -0.25
SKA2-206ENST00000581068 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
SKA2-206ENST00000581068 ATP5JP18859 108 aa13.48□□□□□ -0.25
SKA2-206ENST00000581068 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
SKA2-206ENST00000581068 CELF1Q92879 486 aaKnown RBP13.48□□□□□ -0.25
SKA2-206ENST00000581068 EIF5BO60841 1220 aaKnown RBP13.47□□□□□ -0.25
SKA2-206ENST00000581068 PDE6BP35913 854 aa13.47□□□□□ -0.25
SKA2-206ENST00000581068 CHRNDQ07001 517 aa13.47□□□□□ -0.25
SKA2-206ENST00000581068 GRAPQ13588 217 aa13.47□□□□□ -0.25
SKA2-206ENST00000581068 PUM3Q15397 648 aaKnown RBP13.47□□□□□ -0.25
SKA2-206ENST00000581068 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
SKA2-206ENST00000581068 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
SKA2-206ENST00000581068 HELBQ8NG08 1087 aaPredicted RBP13.47□□□□□ -0.25
SKA2-206ENST00000581068 GRAPLQ8TC17 118 aaPredicted RBP13.47□□□□□ -0.25
SKA2-206ENST00000581068 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
SKA2-206ENST00000581068 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
SKA2-206ENST00000581068 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
SKA2-206ENST00000581068 EP400Q96L91 3159 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 SLC5A1P13866 664 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 FGFR2P21802 821 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.25
SKA2-206ENST00000581068 CCDC158Q5M9N0 1113 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 CASC1Q6TDU7 716 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 CNTROBQ8N137 903 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 LPIN2Q92539 896 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 XAGE2Q96GT9 111 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 CRAMP1Q96RY5 1269 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 ANKRD2Q9GZV1 360 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
SKA2-206ENST00000581068 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
SKA2-206ENST00000581068 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
SKA2-206ENST00000581068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
SKA2-206ENST00000581068 EVI5LQ96CN4 794 aa13.45□□□□□ -0.26
SKA2-206ENST00000581068 BOLA2Q9H3K6 86 aa13.45□□□□□ -0.26
SKA2-206ENST00000581068 TAF5LO75529 589 aa13.44□□□□□ -0.26
SKA2-206ENST00000581068 BBOX1O75936 387 aa13.44□□□□□ -0.26
SKA2-206ENST00000581068 MAP4K4O95819 1239 aaPredicted RBP13.44□□□□□ -0.26
SKA2-206ENST00000581068 ADORA1P30542 326 aa13.44□□□□□ -0.26
SKA2-206ENST00000581068 UBE4AQ14139 1066 aa13.44□□□□□ -0.26
SKA2-206ENST00000581068 TTC39AQ5SRH9 613 aa13.44□□□□□ -0.26
SKA2-206ENST00000581068 TBC1D9Q6ZT07 1266 aa13.44□□□□□ -0.26
SKA2-206ENST00000581068 NPR1P16066 1061 aa13.43□□□□□ -0.26
SKA2-206ENST00000581068 TMC4Q7Z404 712 aa13.43□□□□□ -0.26
SKA2-206ENST00000581068 HAUS7Q99871 368 aa13.43□□□□□ -0.26
SKA2-206ENST00000581068 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
SKA2-206ENST00000581068 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
SKA2-206ENST00000581068 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
SKA2-206ENST00000581068 COL4A1P02462 1669 aa13.43□□□□□ -0.26
SKA2-206ENST00000581068 SEC24BO95487 1268 aa13.42□□□□□ -0.26
SKA2-206ENST00000581068 UQCRFS1P1P0C7P4 283 aa13.42□□□□□ -0.26
SKA2-206ENST00000581068 SRGNP10124 158 aa13.42□□□□□ -0.26
SKA2-206ENST00000581068 ALDH1B1P30837 517 aa13.42□□□□□ -0.26
SKA2-206ENST00000581068 ZNF512BQ96KM6 892 aaPredicted RBP13.42□□□□□ -0.26
SKA2-206ENST00000581068 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
SKA2-206ENST00000581068 H0YIN7 160 aa13.41□□□□□ -0.26
SKA2-206ENST00000581068 CHMLP26374 656 aa13.41□□□□□ -0.26
SKA2-206ENST00000581068 KCNJ4P48050 445 aa13.41□□□□□ -0.26
SKA2-206ENST00000581068 C2CD5Q86YS7 1000 aa13.41□□□□□ -0.26
SKA2-206ENST00000581068 MASTLQ96GX5 879 aa13.41□□□□□ -0.26
SKA2-206ENST00000581068 TAF1P21675 1872 aa13.41□□□□□ -0.26
SKA2-206ENST00000581068 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
SKA2-206ENST00000581068 HIP1O00291 1037 aa13.4□□□□□ -0.26
SKA2-206ENST00000581068 DSG3P32926 999 aa13.4□□□□□ -0.26
SKA2-206ENST00000581068 MFAP1P55081 439 aaKnown RBP13.4□□□□□ -0.26
SKA2-206ENST00000581068 CCDC102BQ68D86 513 aa13.4□□□□□ -0.26
SKA2-206ENST00000581068 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
SKA2-206ENST00000581068 TICAM2Q86XR7 235 aa13.4□□□□□ -0.26
SKA2-206ENST00000581068 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
SKA2-206ENST00000581068 LEMD3Q9Y2U8 911 aa13.4□□□□□ -0.26
SKA2-206ENST00000581068 SNAP23O00161 211 aa13.39□□□□□ -0.27
SKA2-206ENST00000581068 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms