RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 FUCA2Q9BTY2 467 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 CCAR1Q8IX12 1150 aaKnown RBP17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 GCKRQ14397 625 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 CCDC73Q6ZRK6 1079 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 TOPAZ1Q8N9V7 1692 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.37
CUEDC1-206ENST00000577830 ZNF790Q6PG37 636 aa17.33■□□□□ 0.37
CUEDC1-206ENST00000577830 A0A0G2JS52 829 aa17.33■□□□□ 0.36
CUEDC1-206ENST00000577830 CYP21A2P08686 494 aa17.33■□□□□ 0.36
CUEDC1-206ENST00000577830 CCDC94Q9BW85 323 aaPredicted RBP17.33■□□□□ 0.36
CUEDC1-206ENST00000577830 ZBTB3Q9H5J0 574 aa17.33■□□□□ 0.36
CUEDC1-206ENST00000577830 TNNI3KQ59H18 835 aa17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 MTERF4Q7Z6M4 381 aaKnown RBP17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 GPHNQ9NQX3 736 aaPredicted RBP17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 FPGT-TNNI3KV9GXZ4 949 aa17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 TTLL5Q6EMB2 1281 aa17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 NPHP3Q7Z494 1330 aa17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 KINO60870 393 aaKnown RBP17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
CUEDC1-206ENST00000577830 ADGRL3Q9HAR2 1447 aa17.31■□□□□ 0.36
CUEDC1-206ENST00000577830 C19orf44Q9H6X5 657 aa17.31■□□□□ 0.36
CUEDC1-206ENST00000577830 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
CUEDC1-206ENST00000577830 HOXB7P09629 217 aa17.31■□□□□ 0.36
CUEDC1-206ENST00000577830 SCRN1Q12765 414 aa17.31■□□□□ 0.36
CUEDC1-206ENST00000577830 C11orf57Q6ZUT1 292 aaPredicted RBP17.31■□□□□ 0.36
CUEDC1-206ENST00000577830 ZNF75DP51815 510 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 FSIP1Q8NA03 581 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 PTPDC1A2A3K4 754 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 MTX1Q13505 466 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 CCDC144BQ3MJ40 725 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 CACTINQ8WUQ7 758 aaKnown RBP17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 CLSTN2Q9H4D0 955 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 CEMIPQ8WUJ3 1361 aa17.3■□□□□ 0.36
CUEDC1-206ENST00000577830 A0A1B0GVL5 298 aa17.29■□□□□ 0.36
CUEDC1-206ENST00000577830 SMC2O95347 1197 aa17.29■□□□□ 0.36
CUEDC1-206ENST00000577830 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
CUEDC1-206ENST00000577830 GTF3C6Q969F1 213 aa17.29■□□□□ 0.36
CUEDC1-206ENST00000577830 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
CUEDC1-206ENST00000577830 CCDC112Q8NEF3 446 aa17.29■□□□□ 0.36
CUEDC1-206ENST00000577830 PTPN21Q16825 1174 aa17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 CFAP45Q9UL16 551 aa17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 XRN1Q8IZH2 1706 aaKnown RBP17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 AOPEPQ8N6M6 819 aa17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 KRT32Q14532 448 aa17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 HSP90AA4PQ58FG1 418 aa17.28■□□□□ 0.36
CUEDC1-206ENST00000577830 TMEM94Q12767 1356 aa17.27■□□□□ 0.36
CUEDC1-206ENST00000577830 TPM3P06753 285 aa17.27■□□□□ 0.36
CUEDC1-206ENST00000577830 CABP4P57796 275 aa17.27■□□□□ 0.36
CUEDC1-206ENST00000577830 PTPN12Q05209 780 aaKnown RBP17.27■□□□□ 0.36
CUEDC1-206ENST00000577830 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.36
CUEDC1-206ENST00000577830 ZBTB9Q96C00 473 aa17.27■□□□□ 0.36
CUEDC1-206ENST00000577830 RXRAP19793 462 aa17.27■□□□□ 0.35
CUEDC1-206ENST00000577830 PDIA6Q15084 440 aa17.27■□□□□ 0.35
CUEDC1-206ENST00000577830 METTL22Q9BUU2 404 aaPredicted RBP17.27■□□□□ 0.35
CUEDC1-206ENST00000577830 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.35
CUEDC1-206ENST00000577830 APPP05067 770 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 HMG20BQ9P0W2 317 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 PXDNQ92626 1479 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 USP27XA6NNY8 438 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 SKILP12757 684 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 STK38Q15208 465 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 SPTLC3Q9NUV7 552 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 CPLX1O14810 134 aa17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 IFIT1P09914 478 aaKnown RBP17.26■□□□□ 0.35
CUEDC1-206ENST00000577830 RESTQ13127 1097 aa17.25■□□□□ 0.35
CUEDC1-206ENST00000577830 LRRC24Q50LG9 513 aa17.25■□□□□ 0.35
CUEDC1-206ENST00000577830 GOLPH3LQ9H4A5 285 aa17.25■□□□□ 0.35
CUEDC1-206ENST00000577830 FAM177A1Q8N128 213 aaPredicted RBP17.24■□□□□ 0.35
CUEDC1-206ENST00000577830 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
CUEDC1-206ENST00000577830 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
CUEDC1-206ENST00000577830 MARCKSP29966 332 aaPredicted RBP17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 PUS3Q9BZE2 481 aaKnown RBP17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 SLC52A2Q9HAB3 445 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 A1BGP04217 495 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 ATP5JP18859 108 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 CEP135Q66GS9 1140 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 IL17RAQ96F46 866 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 COL15A1P39059 1388 aa17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 ZNF771Q7L3S4 317 aaPredicted RBP17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 DHX32Q7L7V1 743 aaKnown RBP17.23■□□□□ 0.35
CUEDC1-206ENST00000577830 CCDC69A6NI79 296 aa17.22■□□□□ 0.35
CUEDC1-206ENST00000577830 SNRPA1P09661 255 aaKnown RBP17.22■□□□□ 0.35
CUEDC1-206ENST00000577830 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
CUEDC1-206ENST00000577830 ATP2B1P20020 1258 aa17.22■□□□□ 0.35
CUEDC1-206ENST00000577830 NSUN7Q8NE18 718 aaKnown RBP17.22■□□□□ 0.35
CUEDC1-206ENST00000577830 FMN2Q9NZ56 1722 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms