RNA–Protein interactions for RNA: ENST00000575212.1

NPTX1-204, Transcript of neuronal pentraxin 1, humanhuman

TSL 4

Gene NPTX1, Length 472 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-204ENST00000575212 SCN9AQ15858 1988 aa28.85■■■□□ 2.21
NPTX1-204ENST00000575212 EN2P19622 333 aaPredicted RBP28.85■■■□□ 2.21
NPTX1-204ENST00000575212 TMC4Q7Z404 712 aa28.84■■■□□ 2.21
NPTX1-204ENST00000575212 SREBF2Q12772 1141 aa28.83■■■□□ 2.21
NPTX1-204ENST00000575212 POLLQ9UGP5 575 aa28.82■■■□□ 2.2
NPTX1-204ENST00000575212 KDM3BQ7LBC6 1761 aa28.82■■■□□ 2.2
NPTX1-204ENST00000575212 PRAMEF18Q5VWM3 479 aa28.81■■■□□ 2.2
NPTX1-204ENST00000575212 SLC17A8Q8NDX2 589 aa28.81■■■□□ 2.2
NPTX1-204ENST00000575212 THUMPD2Q9BTF0 503 aaKnown RBP28.81■■■□□ 2.2
NPTX1-204ENST00000575212 VIL1P09327 827 aaKnown RBP28.8■■■□□ 2.2
NPTX1-204ENST00000575212 OTOP1Q7RTM1 612 aa28.8■■■□□ 2.2
NPTX1-204ENST00000575212 EYA3Q99504 573 aa28.8■■■□□ 2.2
NPTX1-204ENST00000575212 HTATSF1O43719 755 aaKnown RBP28.79■■■□□ 2.2
NPTX1-204ENST00000575212 CFHR5Q9BXR6 569 aa28.79■■■□□ 2.2
NPTX1-204ENST00000575212 EIF4A1P60842 406 aaKnown RBP28.78■■■□□ 2.2
NPTX1-204ENST00000575212 GPSM2P81274 684 aa28.78■■■□□ 2.2
NPTX1-204ENST00000575212 TRMT112Q9UI30 125 aaKnown RBP28.78■■■□□ 2.2
NPTX1-204ENST00000575212 G3V3G9 751 aa28.77■■■□□ 2.2
NPTX1-204ENST00000575212 ZNF280AP59817 542 aaPredicted RBP28.77■■■□□ 2.2
NPTX1-204ENST00000575212 DCAF8Q5TAQ9 597 aa28.77■■■□□ 2.2
NPTX1-204ENST00000575212 ZNF428Q96B54 188 aa28.77■■■□□ 2.2
NPTX1-204ENST00000575212 PER1O15534 1290 aaPredicted RBP28.76■■■□□ 2.19
NPTX1-204ENST00000575212 U2AF1L5P0DN76 240 aaPredicted RBP28.76■■■□□ 2.19
NPTX1-204ENST00000575212 U2AF1Q01081 240 aaKnown RBP eCLIP28.76■■■□□ 2.19
NPTX1-204ENST00000575212 NLRP10Q86W26 655 aa28.76■■■□□ 2.19
NPTX1-204ENST00000575212 A0A0C4DFX4 3053 aa28.76■■■□□ 2.19
NPTX1-204ENST00000575212 SH3TC1Q8TE82 1336 aa28.75■■■□□ 2.19
NPTX1-204ENST00000575212 PITPNM2Q9BZ72 1349 aa28.75■■■□□ 2.19
NPTX1-204ENST00000575212 PNISRQ8TF01 805 aaKnown RBP28.75■■■□□ 2.19
NPTX1-204ENST00000575212 CELF1Q92879 486 aaKnown RBP28.75■■■□□ 2.19
NPTX1-204ENST00000575212 TCIRG1Q13488 830 aa28.74■■■□□ 2.19
NPTX1-204ENST00000575212 CFAP53Q96M91 514 aa28.74■■■□□ 2.19
NPTX1-204ENST00000575212 ZC3H12CQ9C0D7 883 aaKnown RBP28.74■■■□□ 2.19
NPTX1-204ENST00000575212 MYOZ2Q9NPC6 264 aa28.74■■■□□ 2.19
NPTX1-204ENST00000575212 CUL9Q8IWT3 2517 aa28.74■■■□□ 2.19
NPTX1-204ENST00000575212 NUDCQ9Y266 331 aa28.73■■■□□ 2.19
NPTX1-204ENST00000575212 ERBB4Q15303 1308 aa28.72■■■□□ 2.19
NPTX1-204ENST00000575212 H0YGN5 161 aa28.72■■■□□ 2.19
NPTX1-204ENST00000575212 ALDH1A1P00352 501 aa28.72■■■□□ 2.19
NPTX1-204ENST00000575212 RSBN1LQ6PCB5 846 aaPredicted RBP28.72■■■□□ 2.19
NPTX1-204ENST00000575212 TBC1D16Q8TBP0 767 aa28.72■■■□□ 2.19
NPTX1-204ENST00000575212 TMEM106CQ9BVX2 250 aa28.72■■■□□ 2.19
NPTX1-204ENST00000575212 PTPN22Q9Y2R2 807 aa28.72■■■□□ 2.19
NPTX1-204ENST00000575212 ANXA1P04083 346 aa28.71■■■□□ 2.19
NPTX1-204ENST00000575212 NF2P35240 595 aa28.71■■■□□ 2.19
NPTX1-204ENST00000575212 HSP90AB3PQ58FF7 597 aa28.71■■■□□ 2.19
NPTX1-204ENST00000575212 AGBL3Q8NEM8 1001 aa28.71■■■□□ 2.19
NPTX1-204ENST00000575212 USP17L8P0C7I0 530 aa28.7■■■□□ 2.18
NPTX1-204ENST00000575212 PTPN12Q05209 780 aaKnown RBP28.7■■■□□ 2.18
NPTX1-204ENST00000575212 PRKG1Q13976 671 aa28.7■■■□□ 2.18
NPTX1-204ENST00000575212 ARMC5Q96C12 935 aa28.7■■■□□ 2.18
NPTX1-204ENST00000575212 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.7■■■□□ 2.18
NPTX1-204ENST00000575212 DLG5Q8TDM6 1919 aa28.69■■■□□ 2.18
NPTX1-204ENST00000575212 OTUD5Q96G74 571 aa28.69■■■□□ 2.18
NPTX1-204ENST00000575212 COL4A1P02462 1669 aa28.68■■■□□ 2.18
NPTX1-204ENST00000575212 EIF2S2P20042 333 aaKnown RBP28.68■■■□□ 2.18
NPTX1-204ENST00000575212 PROSER3Q2NL68 480 aa28.68■■■□□ 2.18
NPTX1-204ENST00000575212 CHRDL2Q6WN34 429 aa28.68■■■□□ 2.18
NPTX1-204ENST00000575212 LRP10Q7Z4F1 713 aa28.68■■■□□ 2.18
NPTX1-204ENST00000575212 PSME4Q14997 1843 aa28.67■■■□□ 2.18
NPTX1-204ENST00000575212 AIMP1Q12904 312 aaKnown RBP28.67■■■□□ 2.18
NPTX1-204ENST00000575212 CD99L2Q8TCZ2 262 aa28.67■■■□□ 2.18
NPTX1-204ENST00000575212 ERO1AQ96HE7 468 aa28.67■■■□□ 2.18
NPTX1-204ENST00000575212 COL6A3P12111 3177 aa28.66■■■□□ 2.18
NPTX1-204ENST00000575212 PDIA6Q15084 440 aa28.66■■■□□ 2.18
NPTX1-204ENST00000575212 NBPF9Q3BBW0 867 aa28.66■■■□□ 2.18
NPTX1-204ENST00000575212 SPRYD7Q5W111 196 aa28.66■■■□□ 2.18
NPTX1-204ENST00000575212 ARMC9Q7Z3E5 817 aa28.66■■■□□ 2.18
NPTX1-204ENST00000575212 RANBP2P49792 3224 aaKnown RBP28.66■■■□□ 2.18
NPTX1-204ENST00000575212 UFL1O94874 794 aa28.65■■■□□ 2.18
NPTX1-204ENST00000575212 IFNL1Q8IU54 200 aa28.65■■■□□ 2.18
NPTX1-204ENST00000575212 ZNF609O15014 1411 aa28.65■■■□□ 2.18
NPTX1-204ENST00000575212 EFCC1Q9HA90 598 aa28.64■■■□□ 2.18
NPTX1-204ENST00000575212 COPS6Q7L5N1 327 aa28.63■■■□□ 2.17
NPTX1-204ENST00000575212 MANSC4A6NHS7 340 aaPredicted RBP28.62■■■□□ 2.17
NPTX1-204ENST00000575212 NECTIN2Q92692 538 aa28.62■■■□□ 2.17
NPTX1-204ENST00000575212 GMLQ99445 158 aa28.62■■■□□ 2.17
NPTX1-204ENST00000575212 ANKIB1Q9P2G1 1089 aa28.62■■■□□ 2.17
NPTX1-204ENST00000575212 SF3B3Q15393 1217 aaKnown RBP28.61■■■□□ 2.17
NPTX1-204ENST00000575212 INHBEP58166 350 aa28.6■■■□□ 2.17
NPTX1-204ENST00000575212 SLC4A8Q2Y0W8 1093 aa28.6■■■□□ 2.17
NPTX1-204ENST00000575212 XAGE3Q8WTP9 111 aa28.6■■■□□ 2.17
NPTX1-204ENST00000575212 RBM27Q9P2N5 1060 aaKnown RBP28.6■■■□□ 2.17
NPTX1-204ENST00000575212 GGA1Q9UJY5 639 aa28.6■■■□□ 2.17
NPTX1-204ENST00000575212 ANGEL1Q9UNK9 670 aaKnown RBP28.6■■■□□ 2.17
NPTX1-204ENST00000575212 IGF2BP3O00425 579 aaKnown RBP eCLIP28.59■■■□□ 2.17
NPTX1-204ENST00000575212 MYCP01106 439 aaPredicted RBP28.59■■■□□ 2.17
NPTX1-204ENST00000575212 RPS8P62241 208 aaKnown RBP28.59■■■□□ 2.17
NPTX1-204ENST00000575212 FAM89AQ96GI7 184 aa28.59■■■□□ 2.17
NPTX1-204ENST00000575212 ZNF333Q96JL9 665 aa28.59■■■□□ 2.17
NPTX1-204ENST00000575212 FZD1Q9UP38 647 aa28.58■■■□□ 2.17
NPTX1-204ENST00000575212 USP17L3A6NCW0 530 aa28.57■■■□□ 2.16
NPTX1-204ENST00000575212 USP17L4A6NCW7 530 aa28.57■■■□□ 2.16
NPTX1-204ENST00000575212 RTL5Q5HYW3 569 aaPredicted RBP28.57■■■□□ 2.16
NPTX1-204ENST00000575212 LDLRAD1Q5T700 205 aa28.57■■■□□ 2.16
NPTX1-204ENST00000575212 USP17L1Q7RTZ2 530 aa28.57■■■□□ 2.16
NPTX1-204ENST00000575212 SLC10A4Q96EP9 437 aa28.57■■■□□ 2.16
NPTX1-204ENST00000575212 PODXL2Q9NZ53 605 aa28.57■■■□□ 2.16
NPTX1-204ENST00000575212 CRHR2Q13324 411 aa28.56■■■□□ 2.16
NPTX1-204ENST00000575212 SLC9C1Q4G0N8 1177 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms