RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 LBRQ14739 615 aaKnown RBP7.78□□□□□ -1.16
CNOT1-209ENST00000566240 GSX2Q9BZM3 304 aa7.78□□□□□ -1.16
CNOT1-209ENST00000566240 SRA1Q9HD15 236 aaKnown RBP7.78□□□□□ -1.16
CNOT1-209ENST00000566240 PPP4R2Q9NY27 417 aa7.78□□□□□ -1.16
CNOT1-209ENST00000566240 PCDHGB7Q9Y5F8 929 aa7.78□□□□□ -1.16
CNOT1-209ENST00000566240 EFSO43281 561 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 MAN1A2O60476 641 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 KIAA0319Q5VV43 1072 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 RIPOR1Q6ZS17 1223 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 KRT25Q7Z3Z0 450 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 OR13H1Q8NG92 308 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 PRKAG2Q9UGJ0 569 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 INPP5FQ9Y2H2 1132 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 PCDHGC4Q9Y5F7 938 aa7.77□□□□□ -1.17
CNOT1-209ENST00000566240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.77□□□□□ -1.17
CNOT1-209ENST00000566240 A0A1W2PP55 124 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 KHNYNO15037 678 aaKnown RBP7.76□□□□□ -1.17
CNOT1-209ENST00000566240 MMP20O60882 483 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 EDN3P14138 238 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 GSTT1P30711 240 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 EHD4Q9H223 541 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 LATS2Q9NRM7 1088 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 KANSL3Q9P2N6 904 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 TRAK1Q9UPV9 953 aa7.76□□□□□ -1.17
CNOT1-209ENST00000566240 PHF20L1A8MW92 1017 aa7.75□□□□□ -1.17
CNOT1-209ENST00000566240 THBS1P07996 1170 aa7.75□□□□□ -1.17
CNOT1-209ENST00000566240 RARAP10276 462 aa7.75□□□□□ -1.17
CNOT1-209ENST00000566240 TNP2Q05952 138 aa7.75□□□□□ -1.17
CNOT1-209ENST00000566240 PEAR1Q5VY43 1037 aaPredicted RBP7.75□□□□□ -1.17
CNOT1-209ENST00000566240 GLIS3Q8NEA6 775 aa7.75□□□□□ -1.17
CNOT1-209ENST00000566240 GMLQ99445 158 aa7.75□□□□□ -1.17
CNOT1-209ENST00000566240 SALL4Q9UJQ4 1053 aa7.75□□□□□ -1.17
CNOT1-209ENST00000566240 DCDC2BA2VCK2 349 aa7.74□□□□□ -1.17
CNOT1-209ENST00000566240 VSIG8P0DPA2 414 aa7.74□□□□□ -1.17
CNOT1-209ENST00000566240 ATP2B1P20020 1258 aa7.74□□□□□ -1.17
CNOT1-209ENST00000566240 LAMC2Q13753 1193 aa7.74□□□□□ -1.17
CNOT1-209ENST00000566240 UBAP2LQ14157 1087 aaKnown RBP7.74□□□□□ -1.17
CNOT1-209ENST00000566240 ERMP1Q7Z2K6 904 aa7.74□□□□□ -1.17
CNOT1-209ENST00000566240 PNMA5Q96PV4 448 aa7.74□□□□□ -1.17
CNOT1-209ENST00000566240 NUCKS1Q9H1E3 243 aaKnown RBP7.74□□□□□ -1.17
CNOT1-209ENST00000566240 ZFATQ9P243 1243 aa7.74□□□□□ -1.17
CNOT1-209ENST00000566240 H7C1W4 665 aa7.73□□□□□ -1.17
CNOT1-209ENST00000566240 MAPTP10636 758 aaKnown RBP7.73□□□□□ -1.17
CNOT1-209ENST00000566240 DNAJA1P31689 397 aaKnown RBP7.73□□□□□ -1.17
CNOT1-209ENST00000566240 PTSQ03393 145 aa7.73□□□□□ -1.17
CNOT1-209ENST00000566240 ARID5AQ03989 594 aa7.73□□□□□ -1.17
CNOT1-209ENST00000566240 C3orf58Q8NDZ4 430 aa7.73□□□□□ -1.17
CNOT1-209ENST00000566240 NOC4LQ9BVI4 516 aaKnown RBP7.73□□□□□ -1.17
CNOT1-209ENST00000566240 STRN4Q9NRL3 753 aa7.73□□□□□ -1.17
CNOT1-209ENST00000566240 TTF2Q9UNY4 1162 aaKnown RBP7.73□□□□□ -1.17
CNOT1-209ENST00000566240 SLC35F4A4IF30 521 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 BNIP3LO60238 219 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 PSAPP07602 524 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 NFKB1P19838 968 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 FCGRTP55899 365 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 PRPF40BQ6NWY9 871 aaKnown RBP7.72□□□□□ -1.17
CNOT1-209ENST00000566240 VPS37DQ86XT2 251 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 EFCC1Q9HA90 598 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 COPRSQ9NQ92 184 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 TLR7Q9NYK1 1049 aaKnown RBP7.72□□□□□ -1.17
CNOT1-209ENST00000566240 MARK1Q9P0L2 795 aa7.72□□□□□ -1.17
CNOT1-209ENST00000566240 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-209ENST00000566240 MAP3K6O95382 1288 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 GTF2F1P35269 517 aaKnown RBP eCLIP7.71□□□□□ -1.18
CNOT1-209ENST00000566240 SPEM2Q0P670 501 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 GRIN2CQ14957 1233 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 DBN1Q16643 649 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 NCAPG2Q86XI2 1143 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.18
CNOT1-209ENST00000566240 RSRP1Q9BUV0 290 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 LIN7BQ9HAP6 207 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 NDFIP2Q9NV92 336 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 HCN2Q9UL51 889 aa7.71□□□□□ -1.18
CNOT1-209ENST00000566240 TMEM238LA0A1B0GVL6 79 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 KIF4AO95239 1232 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 XRCC5P13010 732 aaKnown RBP7.7□□□□□ -1.18
CNOT1-209ENST00000566240 SOX18P35713 384 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 HYAL2Q12891 473 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 COL13A1Q5TAT6 717 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-209ENST00000566240 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 TCF12Q99081 682 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
CNOT1-209ENST00000566240 OSMRQ99650 979 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 SLC30A3Q99726 388 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 OXCT2Q9BYC2 517 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-209ENST00000566240 ABCB6Q9NP58 842 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 KBTBD4Q9NVX7 518 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 AKAP2Q9Y2D5 859 aa7.7□□□□□ -1.18
CNOT1-209ENST00000566240 GJA8P48165 433 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 PLAURQ03405 335 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 PAK2Q13177 524 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 CCDC85BQ15834 202 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-209ENST00000566240 DTHD1Q6ZMT9 781 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 DPH6Q7L8W6 267 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 RELL1Q8IUW5 271 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 CCNJLQ8IV13 435 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 ANKRD24Q8TF21 1146 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 BHMTQ93088 406 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 ARMC5Q96C12 935 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms