RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
NEIL1-202ENST00000561643 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
NEIL1-202ENST00000561643 ALDH8A1Q9H2A2 487 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-202ENST00000561643 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
NEIL1-202ENST00000561643 CHGBP05060 677 aa12.97□□□□□ -0.33
NEIL1-202ENST00000561643 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
NEIL1-202ENST00000561643 PLBD2Q8NHP8 589 aa12.97□□□□□ -0.33
NEIL1-202ENST00000561643 JCADQ9P266 1359 aa12.97□□□□□ -0.33
NEIL1-202ENST00000561643 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
NEIL1-202ENST00000561643 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
NEIL1-202ENST00000561643 ALS2Q96Q42 1657 aa12.97□□□□□ -0.33
NEIL1-202ENST00000561643 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 HAUS7Q99871 368 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 FUCA2Q9BTY2 467 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 COL15A1P39059 1388 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 KDM4AO75164 1064 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 CCDC192P0DO97 292 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 MCMDC2Q4G0Z9 681 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 TMEM94Q12767 1356 aa12.96□□□□□ -0.33
NEIL1-202ENST00000561643 SCAND2PQ9GZW5 306 aaPredicted RBP12.96□□□□□ -0.34
NEIL1-202ENST00000561643 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.34
NEIL1-202ENST00000561643 ZNF609O15014 1411 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 Q6ZUG5 572 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 SPATA32Q96LK8 384 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 ELP1O95163 1332 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 JAK2O60674 1132 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 U2AF2P26368 475 aaKnown RBP eCLIP12.95□□□□□ -0.34
NEIL1-202ENST00000561643 CASP7P55210 303 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 CAMK4Q16566 473 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 RFX7Q2KHR2 1363 aa12.95□□□□□ -0.34
NEIL1-202ENST00000561643 CYP21A2P08686 494 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 LIG1P18858 919 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 KBTBD3Q8NAB2 608 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 PRIMPOLQ96LW4 560 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 PDCL2Q8N4E4 241 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 LRRC2Q9BYS8 371 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 TTC12Q9H892 705 aaPredicted RBP12.94□□□□□ -0.34
NEIL1-202ENST00000561643 H3BQV1 296 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 GOLIM4O00461 696 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 NOLC1Q14978 699 aaKnown RBP eCLIP12.94□□□□□ -0.34
NEIL1-202ENST00000561643 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
NEIL1-202ENST00000561643 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
NEIL1-202ENST00000561643 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
NEIL1-202ENST00000561643 TTLL7Q6ZT98 887 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 ZNF771Q7L3S4 317 aaPredicted RBP12.93□□□□□ -0.34
NEIL1-202ENST00000561643 BRF1Q92994 677 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 DDX11Q96FC9 970 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 AFDNP55196 1824 aaKnown RBP12.93□□□□□ -0.34
NEIL1-202ENST00000561643 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 FOXO4P98177 505 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 NBPF14Q5TI25 921 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
NEIL1-202ENST00000561643 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 CHMP4CQ96CF2 233 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 TNMDQ9H2S6 317 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 H7C1W4 665 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 TIMM10P62072 90 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 LEO1Q8WVC0 666 aaPredicted RBP12.93□□□□□ -0.34
NEIL1-202ENST00000561643 PAG1Q9NWQ8 432 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 DACT1Q9NYF0 836 aa12.93□□□□□ -0.34
NEIL1-202ENST00000561643 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
NEIL1-202ENST00000561643 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
NEIL1-202ENST00000561643 CKAP2LQ8IYA6 745 aa12.92□□□□□ -0.34
NEIL1-202ENST00000561643 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
NEIL1-202ENST00000561643 ABCC6O95255 1503 aa12.92□□□□□ -0.34
NEIL1-202ENST00000561643 ARFGEF2Q9Y6D5 1785 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
NEIL1-202ENST00000561643 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 ATG9AQ7Z3C6 839 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 FAM200AQ8TCP9 573 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 SH3TC1Q8TE82 1336 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 COL18A1P39060 1754 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 A1BGP04217 495 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 GTF2F1P35269 517 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEIL1-202ENST00000561643 TYRO3Q06418 890 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
NEIL1-202ENST00000561643 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
NEIL1-202ENST00000561643 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
NEIL1-202ENST00000561643 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
NEIL1-202ENST00000561643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
NEIL1-202ENST00000561643 AP5Z1O43299 807 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 SCRN1Q12765 414 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 SPC24Q8NBT2 197 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 ZNF594Q96JF6 807 aaPredicted RBP12.9□□□□□ -0.34
NEIL1-202ENST00000561643 HELLSQ9NRZ9 838 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 FOSBP53539 338 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 PIP4K2BP78356 416 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms