RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 ERFEQ4G0M1 354 aa12.65□□□□□ -0.38
SEMA6D-209ENST00000558431 VPS9D1Q9Y2B5 631 aa12.65□□□□□ -0.38
SEMA6D-209ENST00000558431 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
SEMA6D-209ENST00000558431 PPP1R3GB7ZBB8 358 aa12.64□□□□□ -0.39
SEMA6D-209ENST00000558431 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-209ENST00000558431 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
SEMA6D-209ENST00000558431 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-209ENST00000558431 ZBED2Q9BTP6 218 aa12.64□□□□□ -0.39
SEMA6D-209ENST00000558431 KLRG2A4D1S0 409 aaPredicted RBP12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 CHL1O00533 1208 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 COL9A1P20849 921 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 ALDH1B1P30837 517 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 ABCC12Q96J65 1359 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 CEP350Q5VT06 3117 aa12.63□□□□□ -0.39
SEMA6D-209ENST00000558431 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 VEGFAP15692 232 aaPredicted RBP12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 APLP1P51693 650 aa12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 ZNF34Q8IZ26 560 aa12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 WDR90Q96KV7 1748 aa12.62□□□□□ -0.39
SEMA6D-209ENST00000558431 APAF1O14727 1248 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 C7orf43Q8WVR3 580 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 LAMB2P55268 1798 aa12.61□□□□□ -0.39
SEMA6D-209ENST00000558431 IBTKQ9P2D0 1353 aaPredicted RBP12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 HRO43593 1189 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 NTSR2O95665 410 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 FSTL1Q12841 308 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 LRP10Q7Z4F1 713 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
SEMA6D-209ENST00000558431 TCERG1O14776 1098 aaKnown RBP12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 FKBP4Q02790 459 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 FAM9BQ8IZU0 186 aa12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 TAF1P21675 1872 aa12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
SEMA6D-209ENST00000558431 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 MBIPQ9NS73 344 aa12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 SCN4AP35499 1836 aa12.58□□□□□ -0.4
SEMA6D-209ENST00000558431 HOXB7P09629 217 aa12.57□□□□□ -0.4
SEMA6D-209ENST00000558431 OSBPP22059 807 aa12.57□□□□□ -0.4
SEMA6D-209ENST00000558431 GNAI1P63096 354 aa12.57□□□□□ -0.4
SEMA6D-209ENST00000558431 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
SEMA6D-209ENST00000558431 TMX4Q9H1E5 349 aaPredicted RBP12.57□□□□□ -0.4
SEMA6D-209ENST00000558431 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
SEMA6D-209ENST00000558431 TRMT112Q9UI30 125 aaKnown RBP12.57□□□□□ -0.4
SEMA6D-209ENST00000558431 POTECB2RU33 542 aa12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 HTRA3P83110 453 aa12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 TCIRG1Q13488 830 aa12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 CC2D2BQ6DHV5 1058 aa12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 CRAMP1Q96RY5 1269 aa12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 IFT57Q9NWB7 429 aa12.56□□□□□ -0.4
SEMA6D-209ENST00000558431 PPEF1O14829 653 aaPredicted RBP12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 PLBD2Q8NHP8 589 aa12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
SEMA6D-209ENST00000558431 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
SEMA6D-209ENST00000558431 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
SEMA6D-209ENST00000558431 SEMA3EO15041 775 aa12.54□□□□□ -0.4
SEMA6D-209ENST00000558431 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
SEMA6D-209ENST00000558431 SLC10A5Q5PT55 438 aa12.54□□□□□ -0.4
SEMA6D-209ENST00000558431 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
SEMA6D-209ENST00000558431 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms