RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 XDHP47989 1333 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 PASKQ96RG2 1323 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 TMEM88BA6NKF7 163 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 E9PSI1 815 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 H7C1D1 291 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 SLC4A10Q6U841 1118 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 JMYQ8N9B5 988 aa15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 MKRN1Q9UHC7 482 aaKnown RBP15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
CDC42BPB-202ENST00000558321 COL4A1P02462 1669 aa15.71■□□□□ 0.11
CDC42BPB-202ENST00000558321 PSMD14O00487 310 aa15.71■□□□□ 0.11
CDC42BPB-202ENST00000558321 ATP2B4P23634 1241 aa15.71■□□□□ 0.11
CDC42BPB-202ENST00000558321 BEND3Q5T5X7 828 aa15.71■□□□□ 0.11
CDC42BPB-202ENST00000558321 PLA2G12BQ9BX93 195 aa15.71■□□□□ 0.11
CDC42BPB-202ENST00000558321 KCNQ5Q9NR82 932 aa15.71■□□□□ 0.11
CDC42BPB-202ENST00000558321 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 ITGA6P23229 1130 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 CASP7P55210 303 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 MPHOSPH8Q99549 860 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 C9orf78Q9NZ63 289 aaPredicted RBP15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 MINPP1Q9UNW1 487 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 CHMP3Q9Y3E7 222 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 LRRC37AA6NMS7 1700 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 RTL9Q8NET4 1388 aa15.7■□□□□ 0.1
CDC42BPB-202ENST00000558321 CSF1RP07333 972 aa15.69■□□□□ 0.1
CDC42BPB-202ENST00000558321 SLFN5Q08AF3 891 aa15.69■□□□□ 0.1
CDC42BPB-202ENST00000558321 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
CDC42BPB-202ENST00000558321 DPF2Q92785 391 aa15.69■□□□□ 0.1
CDC42BPB-202ENST00000558321 ANKRD18BA2A2Z9 1011 aa15.68■□□□□ 0.1
CDC42BPB-202ENST00000558321 RPS12P25398 132 aaKnown RBP15.68■□□□□ 0.1
CDC42BPB-202ENST00000558321 FAM161AQ3B820 660 aa15.68■□□□□ 0.1
CDC42BPB-202ENST00000558321 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
CDC42BPB-202ENST00000558321 ABT1Q9ULW3 272 aaKnown RBP15.68■□□□□ 0.1
CDC42BPB-202ENST00000558321 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
CDC42BPB-202ENST00000558321 SHTN1A0MZ66 631 aa15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 GRM8O00222 908 aa15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 TRAF5O00463 557 aa15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 CCT4P50991 539 aaKnown RBP15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 IFIT5Q13325 482 aaKnown RBP15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 TRPM4Q8TD43 1214 aa15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
CDC42BPB-202ENST00000558321 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 ALDH1L1O75891 902 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 VIL1P09327 827 aaKnown RBP15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 KCNJ4P48050 445 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 HIRAP54198 1017 aaPredicted RBP15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 FOXO4P98177 505 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 TBC1D10BQ4KMP7 808 aaPredicted RBP15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 TAF7LQ5H9L4 462 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 LMBR1LQ6UX01 489 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 SAMD7Q7Z3H4 446 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 ZC3H15Q8WU90 426 aaKnown RBP15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
CDC42BPB-202ENST00000558321 ADAMTSL1Q8N6G6 1762 aa15.65■□□□□ 0.1
CDC42BPB-202ENST00000558321 CCDC57Q2TAC2 916 aa15.65■□□□□ 0.1
CDC42BPB-202ENST00000558321 DEFB115Q30KQ5 88 aa15.65■□□□□ 0.1
CDC42BPB-202ENST00000558321 PODNQ7Z5L7 613 aa15.65■□□□□ 0.1
CDC42BPB-202ENST00000558321 CNTNAP1P78357 1384 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 USP17L3A6NCW0 530 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 USP17L4A6NCW7 530 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 RSBN1LQ6PCB5 846 aaPredicted RBP15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 CDC37L1Q7L3B6 337 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 USP17L1Q7RTZ2 530 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 FBXW7Q969H0 707 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 GLIS2Q9BZE0 524 aaPredicted RBP15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 PGAP2Q9UHJ9 254 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
CDC42BPB-202ENST00000558321 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 VEGFBP49765 207 aa15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 EPHA10Q5JZY3 1008 aa15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 PAXIP1Q6ZW49 1069 aaPredicted RBP15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 USP48Q86UV5 1035 aa15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 ZNF408Q9H9D4 720 aa15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 PTPRCP08575 1304 aa15.63■□□□□ 0.09
CDC42BPB-202ENST00000558321 MED23Q9ULK4 1368 aa15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 CELF2O95319 508 aaKnown RBP15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 CHRNDQ07001 517 aa15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 CST9Q5W186 159 aa15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 AGBL3Q8NEM8 1001 aa15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 HELBQ8NG08 1087 aaPredicted RBP15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 COA1Q9GZY4 146 aa15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 CNNM1Q9NRU3 951 aa15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
CDC42BPB-202ENST00000558321 MYH3P11055 1940 aa15.61■□□□□ 0.09
CDC42BPB-202ENST00000558321 RASSF10A6NK89 507 aa15.61■□□□□ 0.09
CDC42BPB-202ENST00000558321 PLIN1O60240 522 aa15.61■□□□□ 0.09
CDC42BPB-202ENST00000558321 EGFRP00533 1210 aa15.61■□□□□ 0.09
CDC42BPB-202ENST00000558321 KIF4BQ2VIQ3 1234 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms