RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PRIM1P49642 420 aaKnown RBP15.89■□□□□ 0.13
SPG11-210ENST00000558319 KCNH5Q8NCM2 988 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 SYT1P21579 422 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 IQCGQ9H095 443 aaKnown RBP15.89■□□□□ 0.13
SPG11-210ENST00000558319 IARSP41252 1262 aaKnown RBP15.88■□□□□ 0.13
SPG11-210ENST00000558319 SYT10Q6XYQ8 523 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 CCDC129Q6ZRS4 1044 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 CCDC24Q8N4L8 307 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 CCDC61Q9Y6R9 512 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 NESP48681 1621 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 CTAGE9A4FU28 777 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 KIF5BP33176 963 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 ST5P78524 1137 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 ZKSCAN3Q9BRR0 538 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 CWC25Q9NXE8 425 aaPredicted RBP15.88■□□□□ 0.13
SPG11-210ENST00000558319 ORC3Q9UBD5 711 aaPredicted RBP15.88■□□□□ 0.13
SPG11-210ENST00000558319 SAP30BPQ9UHR5 308 aaKnown RBP15.88■□□□□ 0.13
SPG11-210ENST00000558319 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 U2AF2P26368 475 aaKnown RBP eCLIP15.88■□□□□ 0.137e-7■■■□□ 19.1
SPG11-210ENST00000558319 RSRC1Q96IZ7 334 aaKnown RBP15.88■□□□□ 0.13
SPG11-210ENST00000558319 CHPF2Q9P2E5 772 aa15.88■□□□□ 0.13
SPG11-210ENST00000558319 CPSF2Q9P2I0 782 aaKnown RBP15.88■□□□□ 0.13
SPG11-210ENST00000558319 PA2G4Q9UQ80 394 aaKnown RBP15.88■□□□□ 0.13
SPG11-210ENST00000558319 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 RRAGBQ5VZM2 374 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 PPP1R42Q7Z4L9 355 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 ANKRD24Q8TF21 1146 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 LZTFL1Q9NQ48 299 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 ZKSCAN5Q9Y2L8 839 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
SPG11-210ENST00000558319 TCP11L1Q9NUJ3 509 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 HARSP12081 509 aaKnown RBP15.87■□□□□ 0.13
SPG11-210ENST00000558319 WDR66Q8TBY9 1149 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 FLIIQ13045 1269 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 BIN2Q9UBW5 565 aaPredicted RBP15.87■□□□□ 0.13
SPG11-210ENST00000558319 IGHDP01880 384 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 CCDC102BQ68D86 513 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 C16orf71Q8IYS4 520 aaPredicted RBP15.87■□□□□ 0.13
SPG11-210ENST00000558319 EHMT1Q9H9B1 1298 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 KCNK9Q9NPC2 374 aa15.87■□□□□ 0.13
SPG11-210ENST00000558319 CCDC196A0A1B0GTZ2 297 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 TLDC2A0PJX2 215 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 FNBP4Q8N3X1 1017 aaPredicted RBP15.86■□□□□ 0.13
SPG11-210ENST00000558319 RAB34Q9BZG1 259 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 EHBP1Q8NDI1 1231 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 EXOC1Q9NV70 894 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 HLA-DOAP06340 250 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 SYKP43405 635 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 SMC6Q96SB8 1091 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 PABPN1LA6NDY0 278 aaKnown RBP15.86■□□□□ 0.13
SPG11-210ENST00000558319 ZWINTO95229 277 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 TPD52P55327 224 aaPredicted RBP15.86■□□□□ 0.13
SPG11-210ENST00000558319 EIF6P56537 245 aaKnown RBP15.86■□□□□ 0.13
SPG11-210ENST00000558319 IFIT1BQ5T764 474 aaKnown RBP15.86■□□□□ 0.13
SPG11-210ENST00000558319 FAM114A1Q8IWE2 563 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 KLF18A0A0U1RQI7 1052 aa15.86■□□□□ 0.13
SPG11-210ENST00000558319 HMGB1P09429 215 aaKnown RBP15.86■□□□□ 0.13
SPG11-210ENST00000558319 EEF2P13639 858 aaKnown RBP15.86■□□□□ 0.13
SPG11-210ENST00000558319 UBA7P41226 1012 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 ZSCAN22P10073 491 aaPredicted RBP15.85■□□□□ 0.13
SPG11-210ENST00000558319 LRRC59Q96AG4 307 aaKnown RBP15.85■□□□□ 0.13
SPG11-210ENST00000558319 PDE4BQ07343 736 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 MRRFQ96E11 262 aaKnown RBP15.85■□□□□ 0.13
SPG11-210ENST00000558319 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 NOL3O60936 208 aaKnown RBP15.85■□□□□ 0.13
SPG11-210ENST00000558319 ERCC3P19447 782 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 ZYXQ15942 572 aaKnown RBP15.85■□□□□ 0.13
SPG11-210ENST00000558319 TMX3Q96JJ7 454 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 A0A1B0GUL7 405 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 ZNF569Q5MCW4 686 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 CCDC25Q86WR0 208 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 TBC1D32Q96NH3 1257 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 TCHPQ9BT92 498 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 OGFRQ9NZT2 677 aa15.85■□□□□ 0.13
SPG11-210ENST00000558319 HGSO14964 777 aaPredicted RBP15.84■□□□□ 0.13
SPG11-210ENST00000558319 TBCAO75347 108 aaKnown RBP15.84■□□□□ 0.13
SPG11-210ENST00000558319 GSTA5Q7RTV2 222 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 MIPOL1Q8TD10 442 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 SEC62Q99442 399 aaKnown RBP15.84■□□□□ 0.13
SPG11-210ENST00000558319 SELENOOQ9BVL4 669 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 TRIM27P14373 513 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 SF3A3Q12874 501 aaKnown RBP eCLIP15.84■□□□□ 0.133e-6■□□□□ 9.9
SPG11-210ENST00000558319 GUCA1BQ9UMX6 200 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.84■□□□□ 0.132e-6■□□□□ 9.9
SPG11-210ENST00000558319 SORBS3O60504 671 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 NEK1Q96PY6 1258 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 CYLC1P35663 651 aaPredicted RBP15.84■□□□□ 0.13
SPG11-210ENST00000558319 IFI16Q16666 785 aaKnown RBP15.84■□□□□ 0.13
SPG11-210ENST00000558319 CCDC50Q8IVM0 306 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 SIRT1Q96EB6 747 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 DNAI2Q9GZS0 605 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 STX17P56962 302 aa15.84■□□□□ 0.13
SPG11-210ENST00000558319 SARNPP82979 210 aaKnown RBP15.84■□□□□ 0.13
SPG11-210ENST00000558319 CDK13Q14004 1512 aaKnown RBP15.83■□□□□ 0.13
SPG11-210ENST00000558319 ACTN2P35609 894 aa15.83■□□□□ 0.13
SPG11-210ENST00000558319 STAT6P42226 847 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms