RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 SUPT20HQ8NEM7 779 aa13.72□□□□□ -0.21
LYSMD2-203ENST00000558126 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
LYSMD2-203ENST00000558126 GPRC5DQ9NZD1 345 aa13.72□□□□□ -0.21
LYSMD2-203ENST00000558126 BBOX1O75936 387 aa13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 SLC34A2O95436 690 aa13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 NGEFQ8N5V2 710 aa13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 PLEKHF1Q96S99 279 aa13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 ZNRF3Q9ULT6 936 aa13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 COL4A5P29400 1685 aa13.71□□□□□ -0.21
LYSMD2-203ENST00000558126 CACNA1SQ13698 1873 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 PPP1R37O75864 691 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 GPTP24298 496 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 CYP4F22Q6NT55 531 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 LRP10Q7Z4F1 713 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 SAPCD2Q86UD0 394 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 PNNQ9H307 717 aaKnown RBP13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
LYSMD2-203ENST00000558126 MYL6BP14649 208 aa13.69□□□□□ -0.22
LYSMD2-203ENST00000558126 CXCL9Q07325 125 aa13.69□□□□□ -0.22
LYSMD2-203ENST00000558126 NFE2L2Q16236 605 aa13.69□□□□□ -0.22
LYSMD2-203ENST00000558126 SP8Q8IXZ3 490 aa13.69□□□□□ -0.22
LYSMD2-203ENST00000558126 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
LYSMD2-203ENST00000558126 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
LYSMD2-203ENST00000558126 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
LYSMD2-203ENST00000558126 LTBP1Q14766 1721 aa13.68□□□□□ -0.22
LYSMD2-203ENST00000558126 TRAF5O00463 557 aa13.68□□□□□ -0.22
LYSMD2-203ENST00000558126 AOC3Q16853 763 aa13.68□□□□□ -0.22
LYSMD2-203ENST00000558126 BRPF1P55201 1214 aaPredicted RBP13.67□□□□□ -0.22
LYSMD2-203ENST00000558126 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.22
LYSMD2-203ENST00000558126 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
LYSMD2-203ENST00000558126 TNIP1Q15025 636 aa13.67□□□□□ -0.22
LYSMD2-203ENST00000558126 PDIA6Q15084 440 aa13.67□□□□□ -0.22
LYSMD2-203ENST00000558126 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
LYSMD2-203ENST00000558126 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
LYSMD2-203ENST00000558126 ABCC4O15439 1325 aa13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 LAMB4A4D0S4 1761 aa13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 CELF2O95319 508 aaKnown RBP13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 GMPSP49915 693 aaPredicted RBP13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 MLLT1Q03111 559 aaPredicted RBP13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 PAXIP1Q6ZW49 1069 aaPredicted RBP13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 CDC37L1Q7L3B6 337 aa13.66□□□□□ -0.22
LYSMD2-203ENST00000558126 MPNDQ8N594 471 aa13.65□□□□□ -0.22
LYSMD2-203ENST00000558126 NUP98P52948 1817 aa13.64□□□□□ -0.23
LYSMD2-203ENST00000558126 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
LYSMD2-203ENST00000558126 TCERG1O14776 1098 aaKnown RBP13.64□□□□□ -0.23
LYSMD2-203ENST00000558126 HIRAP54198 1017 aaPredicted RBP13.64□□□□□ -0.23
LYSMD2-203ENST00000558126 DPF2Q92785 391 aa13.64□□□□□ -0.23
LYSMD2-203ENST00000558126 RYDENQ9NUL5 291 aaKnown RBP13.64□□□□□ -0.23
LYSMD2-203ENST00000558126 TSPYL4Q9UJ04 414 aa13.64□□□□□ -0.23
LYSMD2-203ENST00000558126 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 AOC2O75106 756 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 NOGQ13253 232 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 GRAPQ13588 217 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 DDX46Q7L014 1031 aaKnown RBP13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 NLRP10Q86W26 655 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 GLIS2Q9BZE0 524 aaPredicted RBP13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 KDM3BQ7LBC6 1761 aa13.63□□□□□ -0.23
LYSMD2-203ENST00000558126 H7C1D1 291 aa13.62□□□□□ -0.23
LYSMD2-203ENST00000558126 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
LYSMD2-203ENST00000558126 CNOT7Q9UIV1 285 aaKnown RBP13.62□□□□□ -0.23
LYSMD2-203ENST00000558126 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
LYSMD2-203ENST00000558126 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
LYSMD2-203ENST00000558126 GRM1Q13255 1194 aa13.61□□□□□ -0.23
LYSMD2-203ENST00000558126 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
LYSMD2-203ENST00000558126 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
LYSMD2-203ENST00000558126 MCOLN1Q9GZU1 580 aa13.61□□□□□ -0.23
LYSMD2-203ENST00000558126 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
LYSMD2-203ENST00000558126 YDJCA8MPS7 323 aa13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 RAD17O75943 681 aa13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 EIF2S2P20042 333 aaKnown RBP13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 RPS12P25398 132 aaKnown RBP13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 SAGE1Q9NXZ1 904 aa13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
LYSMD2-203ENST00000558126 RIPK4P57078 832 aa13.59□□□□□ -0.23
LYSMD2-203ENST00000558126 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
LYSMD2-203ENST00000558126 VARS2Q5ST30 1063 aaKnown RBP13.59□□□□□ -0.23
LYSMD2-203ENST00000558126 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
LYSMD2-203ENST00000558126 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
LYSMD2-203ENST00000558126 CCDC102AQ96A19 550 aa13.59□□□□□ -0.23
LYSMD2-203ENST00000558126 HOXB7P09629 217 aa13.58□□□□□ -0.24
LYSMD2-203ENST00000558126 WASHC4Q2M389 1173 aa13.58□□□□□ -0.24
LYSMD2-203ENST00000558126 TSKSQ9UJT2 592 aa13.58□□□□□ -0.24
LYSMD2-203ENST00000558126 CHL1O00533 1208 aa13.57□□□□□ -0.24
LYSMD2-203ENST00000558126 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
LYSMD2-203ENST00000558126 HUNKP57058 714 aa13.57□□□□□ -0.24
LYSMD2-203ENST00000558126 TRIM28Q13263 835 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms