RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 SPACA7Q96KW9 195 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 ARXQ96QS3 562 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 TFIP11Q9UBB9 837 aaKnown RBP4.39□□□□□ -1.71
PTPN21-209ENST00000557249 SART1O43290 800 aaKnown RBP4.38□□□□□ -1.71
PTPN21-209ENST00000557249 FOXO3O43524 673 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 MMP20O60882 483 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 EGFRP00533 1210 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 SOX18P35713 384 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 FLIIQ13045 1269 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 UVSSAQ2YD98 709 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 UBL7Q96S82 380 aaPredicted RBP4.38□□□□□ -1.71
PTPN21-209ENST00000557249 DBNDD2Q9BQY9 259 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 TRIM33Q9UPN9 1127 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 USP20Q9Y2K6 914 aa4.38□□□□□ -1.71
PTPN21-209ENST00000557249 LINC01387J3KSC0 135 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 OPLAHO14841 1288 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 SMNDC1O75940 238 aaKnown RBP eCLIP4.37□□□□□ -1.71
PTPN21-209ENST00000557249 CD68P34810 354 aaPredicted RBP4.37□□□□□ -1.71
PTPN21-209ENST00000557249 DUOXA2Q1HG44 320 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 RNF43Q68DV7 783 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 TREML1Q86YW5 311 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 ZDHHC13Q8IUH4 622 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 ANKMY2Q8IV38 441 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 TRIM42Q8IWZ5 723 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 MYO19Q96H55 970 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 C7orf69Q9H7B7 122 aa4.37□□□□□ -1.71
PTPN21-209ENST00000557249 QTRT2Q9H974 415 aaKnown RBP4.37□□□□□ -1.71
PTPN21-209ENST00000557249 MAFBQ9Y5Q3 323 aaPredicted RBP4.37□□□□□ -1.71
PTPN21-209ENST00000557249 CDC27P30260 824 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 CDC25BP30305 580 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 PTK7Q13308 1070 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 CEP135Q66GS9 1140 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 NLRP13Q86W25 1043 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 ARMC10Q8N2F6 343 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 GIMAP7Q8NHV1 300 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 LACRTQ9GZZ8 138 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 KCNF1Q9H3M0 494 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 VRTNQ9H8Y1 702 aa4.36□□□□□ -1.71
PTPN21-209ENST00000557249 HMX2A2RU54 273 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L15C9J2P7 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L10C9JJH3 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L13C9JLJ4 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L12C9JPN9 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L11C9JVI0 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L21D6R901 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L18D6R9N7 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L22D6RA61 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L17D6RBQ6 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L19D6RCP7 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L20D6RJB6 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 HOXD8P13378 290 aaPredicted RBP4.35□□□□□ -1.71
PTPN21-209ENST00000557249 SPINK2P20155 84 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 USP17L24Q0WX57 530 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 HYAL2Q12891 473 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 CRTC2Q53ET0 693 aaPredicted RBP4.35□□□□□ -1.71
PTPN21-209ENST00000557249 TXNDC11Q6PKC3 985 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 DTX1Q86Y01 620 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 CLEC10AQ8IUN9 316 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 KLHL23Q8NBE8 558 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 GLMNQ92990 594 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 MYRFLQ96LU7 910 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 FAM13BQ9NYF5 915 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 ANGEL1Q9UNK9 670 aaKnown RBP4.35□□□□□ -1.71
PTPN21-209ENST00000557249 GTF3C3Q9Y5Q9 886 aa4.35□□□□□ -1.71
PTPN21-209ENST00000557249 FAM196BA6NMK8 535 aa4.34□□□□□ -1.71
PTPN21-209ENST00000557249 WISP1O95388 367 aa4.34□□□□□ -1.71
PTPN21-209ENST00000557249 SCNN1AP37088 669 aa4.34□□□□□ -1.71
PTPN21-209ENST00000557249 TTC39BQ5VTQ0 682 aaPredicted RBP4.34□□□□□ -1.71
PTPN21-209ENST00000557249 GALNT11Q8NCW6 608 aa4.34□□□□□ -1.71
PTPN21-209ENST00000557249 SHKBP1Q8TBC3 707 aa4.34□□□□□ -1.71
PTPN21-209ENST00000557249 FAM46AQ96IP4 442 aaKnown RBP4.34□□□□□ -1.71
PTPN21-209ENST00000557249 FAM83CQ9BQN1 747 aa4.34□□□□□ -1.71
PTPN21-209ENST00000557249 FNDC3AQ9Y2H6 1198 aaKnown RBP4.34□□□□□ -1.71
PTPN21-209ENST00000557249 KCNMB2Q9Y691 235 aa4.34□□□□□ -1.71
PTPN21-209ENST00000557249 WDR64B1ANS9 1081 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 UBAP1LF5GYI3 381 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 FSCN2O14926 492 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 GAS2O43903 313 aaKnown RBP4.33□□□□□ -1.72
PTPN21-209ENST00000557249 BMP3P12645 472 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 BRD2P25440 801 aaKnown RBP4.33□□□□□ -1.72
PTPN21-209ENST00000557249 WEE1P30291 646 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 CABP4P57796 275 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 ANKRD34AQ69YU3 496 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 BEND4Q6ZU67 534 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 FAM20CQ8IXL6 584 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 FAM200AQ8TCP9 573 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 PIK3R5Q8WYR1 880 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 CARD10Q9BWT7 1032 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 ATG3Q9NT62 314 aa4.33□□□□□ -1.72
PTPN21-209ENST00000557249 PRR19A6NJB7 356 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 ADAMTS4O75173 837 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 PTPRAP18433 802 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 LMOD1P29536 600 aaPredicted RBP4.32□□□□□ -1.72
PTPN21-209ENST00000557249 ATP11AP98196 1134 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 FDX2Q6P4F2 183 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 KIAA1211Q6ZU35 1233 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 OR13H1Q8NG92 308 aa4.32□□□□□ -1.72
PTPN21-209ENST00000557249 CALR3Q96L12 384 aaKnown RBP4.32□□□□□ -1.72
PTPN21-209ENST00000557249 PPP1R12CQ9BZL4 782 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms