RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 POLLQ9UGP5 575 aa16.73■□□□□ 0.27
PSEN1-220ENST00000557037 LAMB2P55268 1798 aa16.73■□□□□ 0.27
PSEN1-220ENST00000557037 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
PSEN1-220ENST00000557037 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
PSEN1-220ENST00000557037 SCN9AQ15858 1988 aa16.71■□□□□ 0.27
PSEN1-220ENST00000557037 MYCP01106 439 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-220ENST00000557037 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-220ENST00000557037 GPSM2P81274 684 aa16.71■□□□□ 0.27
PSEN1-220ENST00000557037 PTPN12Q05209 780 aaKnown RBP16.71■□□□□ 0.27
PSEN1-220ENST00000557037 PRKG1Q13976 671 aa16.71■□□□□ 0.27
PSEN1-220ENST00000557037 COL6A3P12111 3177 aa16.71■□□□□ 0.27
PSEN1-220ENST00000557037 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-220ENST00000557037 ALDH1A1P00352 501 aa16.7■□□□□ 0.26
PSEN1-220ENST00000557037 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
PSEN1-220ENST00000557037 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
PSEN1-220ENST00000557037 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
PSEN1-220ENST00000557037 EFCC1Q9HA90 598 aa16.7■□□□□ 0.26
PSEN1-220ENST00000557037 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-220ENST00000557037 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
PSEN1-220ENST00000557037 CC2D1BQ5T0F9 858 aaKnown RBP16.69■□□□□ 0.26
PSEN1-220ENST00000557037 SPRYD7Q5W111 196 aa16.69■□□□□ 0.26
PSEN1-220ENST00000557037 TMC4Q7Z404 712 aa16.69■□□□□ 0.26
PSEN1-220ENST00000557037 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
PSEN1-220ENST00000557037 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
PSEN1-220ENST00000557037 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
PSEN1-220ENST00000557037 BRCA2P51587 3418 aa16.68■□□□□ 0.26
PSEN1-220ENST00000557037 MNX1P50219 401 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-220ENST00000557037 CAP1Q01518 475 aa16.68■□□□□ 0.26
PSEN1-220ENST00000557037 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-220ENST00000557037 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
PSEN1-220ENST00000557037 EYA3Q99504 573 aa16.68■□□□□ 0.26
PSEN1-220ENST00000557037 THUMPD2Q9BTF0 503 aaKnown RBP16.68■□□□□ 0.26
PSEN1-220ENST00000557037 RSPH6AQ9H0K4 717 aa16.68■□□□□ 0.26
PSEN1-220ENST00000557037 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
PSEN1-220ENST00000557037 ZNF609O15014 1411 aa16.68■□□□□ 0.26
PSEN1-220ENST00000557037 LRRC37AA6NMS7 1700 aa16.67■□□□□ 0.26
PSEN1-220ENST00000557037 G3V3G9 751 aa16.67■□□□□ 0.26
PSEN1-220ENST00000557037 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
PSEN1-220ENST00000557037 NF2P35240 595 aa16.67■□□□□ 0.26
PSEN1-220ENST00000557037 DCAF8Q5TAQ9 597 aa16.67■□□□□ 0.26
PSEN1-220ENST00000557037 CELF1Q92879 486 aaKnown RBP16.67■□□□□ 0.26
PSEN1-220ENST00000557037 IGF2BP3O00425 579 aaKnown RBP eCLIP16.66■□□□□ 0.26
PSEN1-220ENST00000557037 USP17L8P0C7I0 530 aa16.66■□□□□ 0.26
PSEN1-220ENST00000557037 RSBN1LQ6PCB5 846 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-220ENST00000557037 TBC1D16Q8TBP0 767 aa16.66■□□□□ 0.26
PSEN1-220ENST00000557037 DPF3Q92784 378 aa16.66■□□□□ 0.26
PSEN1-220ENST00000557037 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
PSEN1-220ENST00000557037 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
PSEN1-220ENST00000557037 MANSC4A6NHS7 340 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-220ENST00000557037 NBPF9Q3BBW0 867 aa16.65■□□□□ 0.26
PSEN1-220ENST00000557037 AGBL3Q8NEM8 1001 aa16.65■□□□□ 0.26
PSEN1-220ENST00000557037 ZC3H12CQ9C0D7 883 aaKnown RBP16.65■□□□□ 0.26
PSEN1-220ENST00000557037 FZD1Q9UP38 647 aa16.65■□□□□ 0.26
PSEN1-220ENST00000557037 WTIPA6NIX2 430 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-220ENST00000557037 CRHR2Q13324 411 aa16.64■□□□□ 0.25
PSEN1-220ENST00000557037 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
PSEN1-220ENST00000557037 ARMC9Q7Z3E5 817 aa16.64■□□□□ 0.25
PSEN1-220ENST00000557037 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
PSEN1-220ENST00000557037 SH3TC1Q8TE82 1336 aa16.64■□□□□ 0.25
PSEN1-220ENST00000557037 SOX1O00570 391 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-220ENST00000557037 GMLQ99445 158 aa16.63■□□□□ 0.25
PSEN1-220ENST00000557037 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
PSEN1-220ENST00000557037 PTCH2Q9Y6C5 1203 aa16.63■□□□□ 0.25
PSEN1-220ENST00000557037 COL4A1P02462 1669 aa16.62■□□□□ 0.25
PSEN1-220ENST00000557037 ANXA1P04083 346 aa16.62■□□□□ 0.25
PSEN1-220ENST00000557037 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
PSEN1-220ENST00000557037 SP3Q02447 781 aa16.62■□□□□ 0.25
PSEN1-220ENST00000557037 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
PSEN1-220ENST00000557037 LRCH3Q96II8 777 aa16.62■□□□□ 0.25
PSEN1-220ENST00000557037 UFL1O94874 794 aa16.61■□□□□ 0.25
PSEN1-220ENST00000557037 INHBEP58166 350 aa16.61■□□□□ 0.25
PSEN1-220ENST00000557037 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
PSEN1-220ENST00000557037 NBPF11Q86T75 865 aa16.61■□□□□ 0.25
PSEN1-220ENST00000557037 SLC10A4Q96EP9 437 aa16.61■□□□□ 0.25
PSEN1-220ENST00000557037 PRO3102Q9H379 93 aa16.61■□□□□ 0.25
PSEN1-220ENST00000557037 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
PSEN1-220ENST00000557037 WNK4Q96J92 1243 aa16.6■□□□□ 0.25
PSEN1-220ENST00000557037 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
PSEN1-220ENST00000557037 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
PSEN1-220ENST00000557037 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
PSEN1-220ENST00000557037 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
PSEN1-220ENST00000557037 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
PSEN1-220ENST00000557037 SASH1O94885 1247 aa16.58■□□□□ 0.24
PSEN1-220ENST00000557037 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
PSEN1-220ENST00000557037 AIMP1Q12904 312 aaKnown RBP16.58■□□□□ 0.24
PSEN1-220ENST00000557037 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
PSEN1-220ENST00000557037 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
PSEN1-220ENST00000557037 MXD3Q9BW11 206 aa16.58■□□□□ 0.24
PSEN1-220ENST00000557037 COL25A1Q9BXS0 654 aaPredicted RBP16.58■□□□□ 0.24
PSEN1-220ENST00000557037 ANKIB1Q9P2G1 1089 aa16.58■□□□□ 0.24
PSEN1-220ENST00000557037 ERBB4Q15303 1308 aa16.57■□□□□ 0.24
PSEN1-220ENST00000557037 WNT10BO00744 389 aa16.57■□□□□ 0.24
PSEN1-220ENST00000557037 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
PSEN1-220ENST00000557037 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
PSEN1-220ENST00000557037 PDIA6Q15084 440 aa16.57■□□□□ 0.24
PSEN1-220ENST00000557037 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
PSEN1-220ENST00000557037 GGA1Q9UJY5 639 aa16.57■□□□□ 0.24
PSEN1-220ENST00000557037 USP17L3A6NCW0 530 aa16.56■□□□□ 0.24
PSEN1-220ENST00000557037 USP17L4A6NCW7 530 aa16.56■□□□□ 0.24
PSEN1-220ENST00000557037 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms