RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PLEKHF1Q96S99 279 aa16.65■□□□□ 0.26
PSEN1-219ENST00000556951 PRO3102Q9H379 93 aa16.65■□□□□ 0.26
PSEN1-219ENST00000556951 KCNQ5Q9NR82 932 aa16.65■□□□□ 0.26
PSEN1-219ENST00000556951 ERBB4Q15303 1308 aa16.65■□□□□ 0.26
PSEN1-219ENST00000556951 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
PSEN1-219ENST00000556951 PSMD14O00487 310 aa16.64■□□□□ 0.25
PSEN1-219ENST00000556951 ANXA1P04083 346 aa16.64■□□□□ 0.25
PSEN1-219ENST00000556951 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
PSEN1-219ENST00000556951 DLG5Q8TDM6 1919 aa16.63■□□□□ 0.25
PSEN1-219ENST00000556951 GRAPQ13588 217 aa16.63■□□□□ 0.25
PSEN1-219ENST00000556951 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-219ENST00000556951 KRT26Q7Z3Y9 468 aa16.63■□□□□ 0.25
PSEN1-219ENST00000556951 GRAPLQ8TC17 118 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-219ENST00000556951 LAMB2P55268 1798 aa16.63■□□□□ 0.25
PSEN1-219ENST00000556951 TAF1P21675 1872 aa16.63■□□□□ 0.25
PSEN1-219ENST00000556951 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
PSEN1-219ENST00000556951 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
PSEN1-219ENST00000556951 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
PSEN1-219ENST00000556951 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
PSEN1-219ENST00000556951 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
PSEN1-219ENST00000556951 ARMC5Q96C12 935 aa16.61■□□□□ 0.25
PSEN1-219ENST00000556951 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-219ENST00000556951 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
PSEN1-219ENST00000556951 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
PSEN1-219ENST00000556951 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
PSEN1-219ENST00000556951 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
PSEN1-219ENST00000556951 CFHR5Q9BXR6 569 aa16.6■□□□□ 0.25
PSEN1-219ENST00000556951 DBNDD1Q9H9R9 158 aa16.6■□□□□ 0.25
PSEN1-219ENST00000556951 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
PSEN1-219ENST00000556951 TRIM17Q9Y577 477 aa16.6■□□□□ 0.25
PSEN1-219ENST00000556951 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
PSEN1-219ENST00000556951 TM4SF4P48230 202 aa16.59■□□□□ 0.25
PSEN1-219ENST00000556951 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
PSEN1-219ENST00000556951 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
PSEN1-219ENST00000556951 LRCH3Q96II8 777 aa16.59■□□□□ 0.25
PSEN1-219ENST00000556951 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
PSEN1-219ENST00000556951 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
PSEN1-219ENST00000556951 STXBP5LQ9Y2K9 1186 aa16.59■□□□□ 0.25
PSEN1-219ENST00000556951 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-219ENST00000556951 RIMBP2O15034 1052 aa16.58■□□□□ 0.24
PSEN1-219ENST00000556951 COL9A1P20849 921 aa16.58■□□□□ 0.24
PSEN1-219ENST00000556951 TMC4Q7Z404 712 aa16.58■□□□□ 0.24
PSEN1-219ENST00000556951 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
PSEN1-219ENST00000556951 CELF1Q92879 486 aaKnown RBP16.58■□□□□ 0.24
PSEN1-219ENST00000556951 DCPSQ96C86 337 aaKnown RBP16.58■□□□□ 0.24
PSEN1-219ENST00000556951 TMEM106CQ9BVX2 250 aa16.58■□□□□ 0.24
PSEN1-219ENST00000556951 COL4A1P02462 1669 aa16.58■□□□□ 0.24
PSEN1-219ENST00000556951 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
PSEN1-219ENST00000556951 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
PSEN1-219ENST00000556951 GPSM2P81274 684 aa16.57■□□□□ 0.24
PSEN1-219ENST00000556951 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
PSEN1-219ENST00000556951 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
PSEN1-219ENST00000556951 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
PSEN1-219ENST00000556951 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
PSEN1-219ENST00000556951 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
PSEN1-219ENST00000556951 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
PSEN1-219ENST00000556951 A0A1W2PPC1 479 aa16.56■□□□□ 0.24
PSEN1-219ENST00000556951 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
PSEN1-219ENST00000556951 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
PSEN1-219ENST00000556951 SF3B3Q15393 1217 aaKnown RBP16.56■□□□□ 0.24
PSEN1-219ENST00000556951 HSP90AB3PQ58FF7 597 aa16.56■□□□□ 0.24
PSEN1-219ENST00000556951 ANKRD13DQ6ZTN6 518 aa16.56■□□□□ 0.24
PSEN1-219ENST00000556951 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.56■□□□□ 0.24
PSEN1-219ENST00000556951 PTPN22Q9Y2R2 807 aa16.56■□□□□ 0.24
PSEN1-219ENST00000556951 ECE2O60344 883 aa16.55■□□□□ 0.24
PSEN1-219ENST00000556951 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
PSEN1-219ENST00000556951 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
PSEN1-219ENST00000556951 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
PSEN1-219ENST00000556951 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
PSEN1-219ENST00000556951 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
PSEN1-219ENST00000556951 GGA3Q9NZ52 723 aa16.54■□□□□ 0.24
PSEN1-219ENST00000556951 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
PSEN1-219ENST00000556951 TBC1D16Q8TBP0 767 aa16.53■□□□□ 0.24
PSEN1-219ENST00000556951 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
PSEN1-219ENST00000556951 SCN9AQ15858 1988 aa16.53■□□□□ 0.24
PSEN1-219ENST00000556951 NEFMP07197 916 aa16.52■□□□□ 0.24
PSEN1-219ENST00000556951 ZNF280AP59817 542 aaPredicted RBP16.52■□□□□ 0.24
PSEN1-219ENST00000556951 GPR153Q6NV75 609 aa16.52■□□□□ 0.24
PSEN1-219ENST00000556951 MOB2Q70IA6 237 aa16.52■□□□□ 0.24
PSEN1-219ENST00000556951 SULF1Q8IWU6 871 aa16.52■□□□□ 0.24
PSEN1-219ENST00000556951 FAM89AQ96GI7 184 aa16.52■□□□□ 0.24
PSEN1-219ENST00000556951 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
PSEN1-219ENST00000556951 PLA2G5P39877 138 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 FKBP1BP68106 108 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 SCARF1Q14162 830 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 DEFB123Q8N688 67 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 DPF3Q92784 378 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 ZNF333Q96JL9 665 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 GMLQ99445 158 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 BABAM1Q9NWV8 329 aa16.51■□□□□ 0.23
PSEN1-219ENST00000556951 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
PSEN1-219ENST00000556951 ANGEL2Q5VTE6 544 aaKnown RBP16.5■□□□□ 0.23
PSEN1-219ENST00000556951 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
PSEN1-219ENST00000556951 EYA3Q99504 573 aa16.49■□□□□ 0.23
PSEN1-219ENST00000556951 ATP5J2-PTCD1G3V325 749 aa16.48■□□□□ 0.23
PSEN1-219ENST00000556951 UBE2Q2LH0YL09 131 aa16.48■□□□□ 0.23
PSEN1-219ENST00000556951 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
PSEN1-219ENST00000556951 RIPK4P57078 832 aa16.48■□□□□ 0.23
PSEN1-219ENST00000556951 SREBF2Q12772 1141 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms