RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TBX22Q9Y458 520 aa6.68□□□□□ -1.34
ATXN3-238ENST00000556288 DYRK1BQ9Y463 629 aa6.68□□□□□ -1.34
ATXN3-238ENST00000556288 RPGRIP1LQ68CZ1 1315 aa6.68□□□□□ -1.34
ATXN3-238ENST00000556288 LTBP4Q8N2S1 1624 aa6.68□□□□□ -1.34
ATXN3-238ENST00000556288 PLEKHG1Q9ULL1 1385 aa6.68□□□□□ -1.34
ATXN3-238ENST00000556288 IFT172Q9UG01 1749 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 NOS2P35228 1153 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 SWI5Q1ZZU3 235 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 TMEM132EQ6IEE7 984 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 RIPOR1Q6ZS17 1223 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 GAS2L2Q8NHY3 880 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 L3MBTL2Q969R5 705 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 CHMP3Q9Y3E7 222 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
ATXN3-238ENST00000556288 CPS1P31327 1500 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 NEXMIFQ5QGS0 1516 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 A0A1B0GTH6 734 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 SERTM1A2A2V5 107 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-238ENST00000556288 C21orf2O43822 256 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 PPFIA3O75145 1194 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 TEAD4Q15561 434 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 GPAT2Q6NUI2 795 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 ZNF295-AS1Q8N0V1 137 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 PRIMPOLQ96LW4 560 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 GPAMQ9HCL2 828 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 ADGRF5Q8IZF2 1346 aa6.66□□□□□ -1.34
ATXN3-238ENST00000556288 RGPD8O14715 1765 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-238ENST00000556288 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-238ENST00000556288 PRMT3O60678 531 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 F11P03951 625 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 ATF3P18847 181 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 IGFBP4P22692 258 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 MSX1P28360 303 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 PSMA6P60900 246 aaKnown RBP6.65□□□□□ -1.34
ATXN3-238ENST00000556288 NBPF1Q3BBV0 1214 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 ZDHHC1Q8WTX9 485 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
ATXN3-238ENST00000556288 ANKRD30BQ9BXX2 1392 aa6.65□□□□□ -1.35
ATXN3-238ENST00000556288 ITGA6P23229 1130 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 WEE1P30291 646 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATXN3-238ENST00000556288 PGBD3Q8N328 593 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 ADAMTS8Q9UP79 889 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 HCN4Q9Y3Q4 1203 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 TMEM94Q12767 1356 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 LRRC7Q96NW7 1537 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 ALKQ9UM73 1620 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 NRXN3Q9Y4C0 1643 aa6.64□□□□□ -1.35
ATXN3-238ENST00000556288 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-238ENST00000556288 CARNS1A5YM72 827 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 EML1O00423 815 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 METP08581 1390 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 TATP17735 454 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-238ENST00000556288 TXLNAP40222 546 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 MSH6P52701 1360 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 ARSJQ5FYB0 599 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-238ENST00000556288 SH3PXD2AQ5TCZ1 1133 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 WAPLQ7Z5K2 1190 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 STAG2Q8N3U4 1231 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 C1orf216Q8TAB5 229 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-238ENST00000556288 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
ATXN3-238ENST00000556288 VTI1AQ96AJ9 217 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 C2orf49Q9BVC5 232 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-238ENST00000556288 RUBCNLQ9H714 662 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 POGKQ9P215 609 aa6.63□□□□□ -1.35
ATXN3-238ENST00000556288 DIP2AQ14689 1571 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 ADAMTS13Q76LX8 1427 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 CDC14CA4D256 554 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 TMEM88BA6NKF7 163 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 H7C1W4 665 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 IGHA1P01876 353 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 DBN1Q16643 649 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 BICDL1Q6ZP65 573 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 VWA5B2Q8N398 1253 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 RETREG2Q8NC44 543 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 NGLY1Q96IV0 654 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 CUEDC1Q9NWM3 386 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-238ENST00000556288 ZDHHC3Q9NYG2 299 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 SLAIN2Q9P270 581 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 TRAK1Q9UPV9 953 aa6.62□□□□□ -1.35
ATXN3-238ENST00000556288 DNMT3AQ9Y6K1 912 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-238ENST00000556288 SETD1AO15047 1707 aaKnown RBP6.62□□□□□ -1.35
ATXN3-238ENST00000556288 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 PTPRUQ92729 1446 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 DHX57Q6P158 1386 aaKnown RBP6.61□□□□□ -1.35
ATXN3-238ENST00000556288 FOXO3O43524 673 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 ATP2B4P23634 1241 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 HSPA1LP34931 641 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 HIRAP54198 1017 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-238ENST00000556288 OCLNQ16625 522 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 SV2AQ7L0J3 742 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 TRIM22Q8IYM9 498 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 PHACTR1Q9C0D0 580 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 C19orf44Q9H6X5 657 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 C14orf93Q9H972 538 aaKnown RBP6.61□□□□□ -1.35
ATXN3-238ENST00000556288 PHLPP1O60346 1717 aa6.61□□□□□ -1.35
ATXN3-238ENST00000556288 SETBP1Q9Y6X0 1596 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms