RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 STARD3NLO95772 234 aa15.88■□□□□ 0.13
ABCD4-222ENST00000555617 MAGEA10P43363 369 aaPredicted RBP15.88■□□□□ 0.13
ABCD4-222ENST00000555617 FZD1Q9UP38 647 aa15.88■□□□□ 0.13
ABCD4-222ENST00000555617 KIF7Q2M1P5 1343 aa15.88■□□□□ 0.13
ABCD4-222ENST00000555617 NIP7Q9Y221 180 aaKnown RBP eCLIP15.87■□□□□ 0.13
ABCD4-222ENST00000555617 SYN1P17600 705 aa15.86■□□□□ 0.13
ABCD4-222ENST00000555617 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
ABCD4-222ENST00000555617 MYLIPQ8WY64 445 aa15.86■□□□□ 0.13
ABCD4-222ENST00000555617 SCARF1Q14162 830 aa15.85■□□□□ 0.13
ABCD4-222ENST00000555617 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
ABCD4-222ENST00000555617 PTPN18Q99952 460 aa15.85■□□□□ 0.13
ABCD4-222ENST00000555617 PRKG1Q13976 671 aa15.84■□□□□ 0.13
ABCD4-222ENST00000555617 C7orf61Q8IZ16 206 aa15.84■□□□□ 0.13
ABCD4-222ENST00000555617 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
ABCD4-222ENST00000555617 RPGRQ92834 1020 aaKnown RBP15.84■□□□□ 0.13
ABCD4-222ENST00000555617 ZNF496Q96IT1 587 aaPredicted RBP15.84■□□□□ 0.13
ABCD4-222ENST00000555617 P2RX7Q99572 595 aaKnown RBP15.84■□□□□ 0.13
ABCD4-222ENST00000555617 ATP6V0A2Q9Y487 856 aa15.84■□□□□ 0.13
ABCD4-222ENST00000555617 MANSC4A6NHS7 340 aaPredicted RBP15.83■□□□□ 0.12
ABCD4-222ENST00000555617 GJB1P08034 283 aa15.83■□□□□ 0.12
ABCD4-222ENST00000555617 TNNT2P45379 298 aaPredicted RBP15.83■□□□□ 0.12
ABCD4-222ENST00000555617 CRAMP1Q96RY5 1269 aa15.83■□□□□ 0.12
ABCD4-222ENST00000555617 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
ABCD4-222ENST00000555617 HCN4Q9Y3Q4 1203 aa15.83■□□□□ 0.12
ABCD4-222ENST00000555617 CCL5P13501 91 aa15.82■□□□□ 0.12
ABCD4-222ENST00000555617 MRE11P49959 708 aa15.82■□□□□ 0.12
ABCD4-222ENST00000555617 LDLRAD1Q5T700 205 aa15.82■□□□□ 0.12
ABCD4-222ENST00000555617 CLEC4GQ6UXB4 293 aa15.82■□□□□ 0.12
ABCD4-222ENST00000555617 LRFN3Q9BTN0 628 aa15.82■□□□□ 0.12
ABCD4-222ENST00000555617 DBNDD1Q9H9R9 158 aa15.82■□□□□ 0.12
ABCD4-222ENST00000555617 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
ABCD4-222ENST00000555617 RNMTO43148 476 aaKnown RBP15.81■□□□□ 0.12
ABCD4-222ENST00000555617 PUS7Q96PZ0 661 aaKnown RBP15.81■□□□□ 0.12
ABCD4-222ENST00000555617 HEG1Q9ULI3 1381 aa15.81■□□□□ 0.12
ABCD4-222ENST00000555617 LAMB2P55268 1798 aa15.8■□□□□ 0.12
ABCD4-222ENST00000555617 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
ABCD4-222ENST00000555617 GJA5P36382 358 aa15.8■□□□□ 0.12
ABCD4-222ENST00000555617 TCIRG1Q13488 830 aa15.8■□□□□ 0.12
ABCD4-222ENST00000555617 HLFQ16534 295 aa15.8■□□□□ 0.12
ABCD4-222ENST00000555617 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
ABCD4-222ENST00000555617 SUPT20HQ8NEM7 779 aa15.8■□□□□ 0.12
ABCD4-222ENST00000555617 NKX2-3Q8TAU0 364 aa15.8■□□□□ 0.12
ABCD4-222ENST00000555617 U2AF1L4Q8WU68 220 aaKnown RBP15.8■□□□□ 0.12
ABCD4-222ENST00000555617 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
ABCD4-222ENST00000555617 UBE2OQ9C0C9 1292 aaKnown RBP15.8■□□□□ 0.12
ABCD4-222ENST00000555617 ADAMTS19Q8TE59 1207 aa15.79■□□□□ 0.12
ABCD4-222ENST00000555617 WNK4Q96J92 1243 aa15.79■□□□□ 0.12
ABCD4-222ENST00000555617 TCF20Q9UGU0 1960 aaKnown RBP15.78■□□□□ 0.12
ABCD4-222ENST00000555617 RPS12P25398 132 aaKnown RBP15.78■□□□□ 0.12
ABCD4-222ENST00000555617 INHBEP58166 350 aa15.78■□□□□ 0.12
ABCD4-222ENST00000555617 ZNF697Q5TEC3 545 aa15.78■□□□□ 0.12
ABCD4-222ENST00000555617 DIS3LQ8TF46 1054 aaKnown RBP15.78■□□□□ 0.12
ABCD4-222ENST00000555617 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
ABCD4-222ENST00000555617 NUP98P52948 1817 aa15.78■□□□□ 0.12
ABCD4-222ENST00000555617 LRRC37AA6NMS7 1700 aa15.77■□□□□ 0.12
ABCD4-222ENST00000555617 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.12
ABCD4-222ENST00000555617 CTGFP29279 349 aa15.77■□□□□ 0.12
ABCD4-222ENST00000555617 RBM17Q96I25 401 aaKnown RBP15.77■□□□□ 0.12
ABCD4-222ENST00000555617 NECAB3Q96P71 396 aaPredicted RBP15.77■□□□□ 0.12
ABCD4-222ENST00000555617 RNF208Q9H0X6 261 aa15.77■□□□□ 0.12
ABCD4-222ENST00000555617 SEMA6BQ9H3T3 888 aa15.77■□□□□ 0.12
ABCD4-222ENST00000555617 SIPA1L3O60292 1781 aaPredicted RBP15.77■□□□□ 0.11
ABCD4-222ENST00000555617 ABCC4O15439 1325 aa15.76■□□□□ 0.11
ABCD4-222ENST00000555617 ZNF280AP59817 542 aaPredicted RBP15.76■□□□□ 0.11
ABCD4-222ENST00000555617 TTYH1Q9H313 450 aaPredicted RBP15.76■□□□□ 0.11
ABCD4-222ENST00000555617 PSME4Q14997 1843 aa15.75■□□□□ 0.11
ABCD4-222ENST00000555617 C1QTNF1Q9BXJ1 281 aa15.75■□□□□ 0.11
ABCD4-222ENST00000555617 UNC93B1Q9H1C4 597 aa15.75■□□□□ 0.11
ABCD4-222ENST00000555617 PKD1L2Q7Z442 2459 aa15.74■□□□□ 0.11
ABCD4-222ENST00000555617 FOSL2P15408 326 aa15.74■□□□□ 0.11
ABCD4-222ENST00000555617 PAWRQ96IZ0 340 aaKnown RBP15.74■□□□□ 0.11
ABCD4-222ENST00000555617 UHRF1Q96T88 793 aaPredicted RBP15.74■□□□□ 0.11
ABCD4-222ENST00000555617 ZNF652Q9Y2D9 606 aa15.74■□□□□ 0.11
ABCD4-222ENST00000555617 ZDBF2Q9HCK1 2354 aa15.73■□□□□ 0.11
ABCD4-222ENST00000555617 OTOFQ9HC10 1997 aa15.73■□□□□ 0.11
ABCD4-222ENST00000555617 EPHX3Q9H6B9 360 aa15.73■□□□□ 0.11
ABCD4-222ENST00000555617 ANGEL1Q9UNK9 670 aaKnown RBP15.73■□□□□ 0.11
ABCD4-222ENST00000555617 BAHCC1Q9P281 2608 aa15.73■□□□□ 0.11
ABCD4-222ENST00000555617 COL4A1P02462 1669 aa15.73■□□□□ 0.11
ABCD4-222ENST00000555617 CACNA1BQ00975 2339 aa15.72■□□□□ 0.11
ABCD4-222ENST00000555617 SGPL1O95470 568 aa15.72■□□□□ 0.11
ABCD4-222ENST00000555617 ZBTB48P10074 688 aaPredicted RBP15.72■□□□□ 0.11
ABCD4-222ENST00000555617 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
ABCD4-222ENST00000555617 CARD14Q9BXL6 1004 aa15.72■□□□□ 0.11
ABCD4-222ENST00000555617 NBPF26B4DH59 902 aa15.71■□□□□ 0.11
ABCD4-222ENST00000555617 RIMBP2O15034 1052 aa15.71■□□□□ 0.11
ABCD4-222ENST00000555617 RGL2O15211 777 aa15.71■□□□□ 0.11
ABCD4-222ENST00000555617 ECE2O60344 883 aa15.71■□□□□ 0.11
ABCD4-222ENST00000555617 NBPF9Q3BBW0 867 aa15.71■□□□□ 0.11
ABCD4-222ENST00000555617 TESK2Q96S53 571 aa15.71■□□□□ 0.11
ABCD4-222ENST00000555617 UBN2Q6ZU65 1347 aa15.7■□□□□ 0.1
ABCD4-222ENST00000555617 CFAP54Q96N23 3096 aa15.7■□□□□ 0.1
ABCD4-222ENST00000555617 TESPA1A2RU30 521 aaPredicted RBP15.7■□□□□ 0.1
ABCD4-222ENST00000555617 VIL1P09327 827 aaKnown RBP15.7■□□□□ 0.1
ABCD4-222ENST00000555617 GRK4P32298 578 aa15.7■□□□□ 0.1
ABCD4-222ENST00000555617 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
ABCD4-222ENST00000555617 ARMC9Q7Z3E5 817 aa15.7■□□□□ 0.1
ABCD4-222ENST00000555617 SP8Q8IXZ3 490 aa15.7■□□□□ 0.1
ABCD4-222ENST00000555617 C11orf16Q9NQ32 467 aa15.7■□□□□ 0.1
ABCD4-222ENST00000555617 RIPOR2Q9Y4F9 1068 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms