RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 PARP3Q9Y6F1 533 aa9.45□□□□□ -0.9
GPHN-208ENST00000555503 KCPQ6ZWJ8 1503 aa9.45□□□□□ -0.9
GPHN-208ENST00000555503 IGSF3O75054 1194 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
GPHN-208ENST00000555503 CRKLP46109 303 aaKnown RBP9.44□□□□□ -0.9
GPHN-208ENST00000555503 LHX8Q68G74 356 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 NLGN1Q8N2Q7 840 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 NFATC2IPQ8NCF5 419 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 ZBED2Q9BTP6 218 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 CCDC87Q9NVE4 849 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 PLEKHG2Q9H7P9 1386 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 MRC1P22897 1456 aa9.44□□□□□ -0.9
GPHN-208ENST00000555503 PER1O15534 1290 aaPredicted RBP9.43□□□□□ -0.9
GPHN-208ENST00000555503 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
GPHN-208ENST00000555503 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
GPHN-208ENST00000555503 NMRK2Q9NPI5 230 aa9.43□□□□□ -0.9
GPHN-208ENST00000555503 USP42Q9H9J4 1324 aaKnown RBP9.42□□□□□ -0.9
GPHN-208ENST00000555503 HMOX1P09601 288 aa9.42□□□□□ -0.9
GPHN-208ENST00000555503 TGFB2P61812 414 aa9.42□□□□□ -0.9
GPHN-208ENST00000555503 DDR1Q08345 913 aa9.42□□□□□ -0.9
GPHN-208ENST00000555503 NR1H3Q13133 447 aa9.42□□□□□ -0.9
GPHN-208ENST00000555503 CNGB1Q14028 1251 aaPredicted RBP9.42□□□□□ -0.9
GPHN-208ENST00000555503 IFFO2Q5TF58 517 aa9.42□□□□□ -0.9
GPHN-208ENST00000555503 ZMIZ1Q9ULJ6 1067 aa9.42□□□□□ -0.9
GPHN-208ENST00000555503 SLX4Q8IY92 1834 aa9.42□□□□□ -0.9
GPHN-208ENST00000555503 KCNA3P22001 575 aa9.41□□□□□ -0.9
GPHN-208ENST00000555503 CHRNA5P30532 468 aa9.41□□□□□ -0.9
GPHN-208ENST00000555503 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
GPHN-208ENST00000555503 DESI1Q6ICB0 168 aa9.41□□□□□ -0.9
GPHN-208ENST00000555503 RETREG3Q86VR2 466 aa9.41□□□□□ -0.9
GPHN-208ENST00000555503 DNAJC10Q8IXB1 793 aa9.41□□□□□ -0.9
GPHN-208ENST00000555503 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
GPHN-208ENST00000555503 CLSPNQ9HAW4 1339 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 CFHP08603 1231 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 IL13P35225 146 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 TMEM164Q5U3C3 297 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 C9orf131Q5VYM1 1079 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 INTS5Q6P9B9 1019 aaKnown RBP9.4□□□□□ -0.9
GPHN-208ENST00000555503 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
GPHN-208ENST00000555503 COL15A1P39059 1388 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 POTEJP0CG39 1038 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 HTRA3P83110 453 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 USPL1Q5W0Q7 1092 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 CCER1Q8TC90 406 aaPredicted RBP9.39□□□□□ -0.91
GPHN-208ENST00000555503 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 RNF181Q9P0P0 153 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 NUP98P52948 1817 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 LAMB4A4D0S4 1761 aa9.39□□□□□ -0.91
GPHN-208ENST00000555503 SOS1Q07889 1333 aaPredicted RBP9.38□□□□□ -0.91
GPHN-208ENST00000555503 POLRMTO00411 1230 aaKnown RBP9.38□□□□□ -0.91
GPHN-208ENST00000555503 ZPR1O75312 459 aa9.38□□□□□ -0.91
GPHN-208ENST00000555503 TOMM70O94826 608 aa9.38□□□□□ -0.91
GPHN-208ENST00000555503 FBXO45P0C2W1 286 aa9.38□□□□□ -0.91
GPHN-208ENST00000555503 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
GPHN-208ENST00000555503 RASSF7Q02833 373 aa9.38□□□□□ -0.91
GPHN-208ENST00000555503 DALRD3Q5D0E6 543 aaKnown RBP9.38□□□□□ -0.91
GPHN-208ENST00000555503 AKAP4Q5JQC9 854 aa9.38□□□□□ -0.91
GPHN-208ENST00000555503 PLEKHM2Q8IWE5 1019 aa9.38□□□□□ -0.91
GPHN-208ENST00000555503 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
GPHN-208ENST00000555503 SLC52A2Q9HAB3 445 aa9.38□□□□□ -0.91
GPHN-208ENST00000555503 NOVA2Q9UNW9 492 aaKnown RBP9.38□□□□□ -0.91
GPHN-208ENST00000555503 COL3A1P02461 1466 aaPredicted RBP9.38□□□□□ -0.91
GPHN-208ENST00000555503 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
GPHN-208ENST00000555503 KIF7Q2M1P5 1343 aa9.37□□□□□ -0.91
GPHN-208ENST00000555503 PIK3CDO00329 1044 aa9.37□□□□□ -0.91
GPHN-208ENST00000555503 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
GPHN-208ENST00000555503 APLP1P51693 650 aa9.37□□□□□ -0.91
GPHN-208ENST00000555503 CC2D1BQ5T0F9 858 aaKnown RBP9.37□□□□□ -0.91
GPHN-208ENST00000555503 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
GPHN-208ENST00000555503 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
GPHN-208ENST00000555503 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
GPHN-208ENST00000555503 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
GPHN-208ENST00000555503 RBM47A0AV96 593 aaKnown RBP9.36□□□□□ -0.91
GPHN-208ENST00000555503 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 CYP19A1P11511 503 aaPredicted RBP9.36□□□□□ -0.91
GPHN-208ENST00000555503 CANXP27824 592 aaKnown RBP9.36□□□□□ -0.91
GPHN-208ENST00000555503 NFIXQ14938 502 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 MTHFSDQ2M296 383 aaKnown RBP9.36□□□□□ -0.91
GPHN-208ENST00000555503 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 LYPD8Q6UX82 237 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 RRAGCQ9HB90 399 aa9.36□□□□□ -0.91
GPHN-208ENST00000555503 UNCXA6NJT0 531 aa9.35□□□□□ -0.91
GPHN-208ENST00000555503 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
GPHN-208ENST00000555503 TM4SF1P30408 202 aa9.35□□□□□ -0.91
GPHN-208ENST00000555503 MORN1Q5T089 497 aa9.35□□□□□ -0.91
GPHN-208ENST00000555503 KDM3BQ7LBC6 1761 aa9.35□□□□□ -0.91
GPHN-208ENST00000555503 KDM2BQ8NHM5 1336 aa9.34□□□□□ -0.91
GPHN-208ENST00000555503 SCN4AP35499 1836 aa9.34□□□□□ -0.91
GPHN-208ENST00000555503 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
GPHN-208ENST00000555503 DIAPH1O60610 1272 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms