RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 NCOA5Q9HCD5 579 aaKnown RBP19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 COL15A1P39059 1388 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 PXDNQ92626 1479 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 SLU7O95391 586 aaKnown RBP19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 ZC3H6P61129 1189 aaKnown RBP19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 SLC20A2Q08357 652 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 ORAI2Q96SN7 254 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 CEMIPQ8WUJ3 1361 aa19.85■□□□□ 0.77
PPP4R3A-202ENST00000554390 TRERF1Q96PN7 1200 aa19.85■□□□□ 0.77
PPP4R3A-202ENST00000554390 SCAND2PQ9GZW5 306 aaPredicted RBP19.85■□□□□ 0.77
PPP4R3A-202ENST00000554390 NPHP3Q7Z494 1330 aa19.85■□□□□ 0.77
PPP4R3A-202ENST00000554390 RPS6KB1P23443 525 aa19.85■□□□□ 0.77
PPP4R3A-202ENST00000554390 FAM193AP78312 1265 aa19.84■□□□□ 0.77
PPP4R3A-202ENST00000554390 Q6ZUG5 572 aa19.84■□□□□ 0.77
PPP4R3A-202ENST00000554390 NEMFO60524 1076 aa19.84■□□□□ 0.77
PPP4R3A-202ENST00000554390 TFCP2Q12800 502 aa19.84■□□□□ 0.77
PPP4R3A-202ENST00000554390 COPS6Q7L5N1 327 aa19.84■□□□□ 0.77
PPP4R3A-202ENST00000554390 GOLGA6L19H0YKK7 550 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 H3BQV1 296 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 CYP2C19P33261 490 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 IFFO2Q5TF58 517 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 XAGE3Q8WTP9 111 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 CACNA1FO60840 1977 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 FILIP1Q7Z7B0 1213 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 GTF3C6Q969F1 213 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 DBNLQ9UJU6 430 aaKnown RBP19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 TBX22Q9Y458 520 aa19.83■□□□□ 0.77
PPP4R3A-202ENST00000554390 CCDC69A6NI79 296 aa19.83■□□□□ 0.76
PPP4R3A-202ENST00000554390 BMS1Q14692 1282 aaKnown RBP19.83■□□□□ 0.76
PPP4R3A-202ENST00000554390 C11orf57Q6ZUT1 292 aaPredicted RBP19.83■□□□□ 0.76
PPP4R3A-202ENST00000554390 DBNDD2Q9BQY9 259 aa19.83■□□□□ 0.76
PPP4R3A-202ENST00000554390 HNRNPH2P55795 449 aaKnown RBP19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 AKAP4Q5JQC9 854 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 UBE3BQ7Z3V4 1068 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 CREBRFQ8IUR6 639 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 CCAR2Q8N163 923 aaKnown RBP19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 CCZ1BP86790 482 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 CCZ1P86791 482 aaPredicted RBP19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 IQCB1Q15051 598 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 PLEKHO1Q53GL0 409 aaPredicted RBP19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 MRFAP1L1Q96HT8 127 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 TM6SF1Q9BZW5 370 aa19.82■□□□□ 0.76
PPP4R3A-202ENST00000554390 TAF5LO75529 589 aa19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 ERCC6LQ2NKX8 1250 aa19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 SARM1Q6SZW1 724 aa19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 PDCP20941 246 aa19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 NFATC2IPQ8NCF5 419 aa19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 GPHNQ9NQX3 736 aaPredicted RBP19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 USP42Q9H9J4 1324 aaKnown RBP19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 NPHP4O75161 1426 aaPredicted RBP19.81■□□□□ 0.76
PPP4R3A-202ENST00000554390 CYP21A2P08686 494 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 APOBRQ0VD83 1088 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 ANKRD24Q8TF21 1146 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 NEUROD6Q96NK8 337 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 BABAM1Q9NWV8 329 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 H2AFXP16104 143 aaPredicted RBP19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 PSMA5P28066 241 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 MTX1Q13505 466 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 HSP90AB3PQ58FF7 597 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 LINS1Q8NG48 757 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 DDX17Q92841 729 aaKnown RBP19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 GJB4Q9NTQ9 266 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 FHOD1Q9Y613 1164 aa19.8■□□□□ 0.76
PPP4R3A-202ENST00000554390 RGPD2P0DJD1 1756 aa19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 CAVIN2O95810 425 aa19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 PDIA6Q15084 440 aa19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 RNF20Q5VTR2 975 aa19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 STOX1Q6ZVD7 989 aa19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 PDIA4P13667 645 aaKnown RBP19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 SCRN1Q12765 414 aa19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 ERC1Q8IUD2 1116 aa19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
PPP4R3A-202ENST00000554390 GCP02774 474 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 PTPN21Q16825 1174 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 NEK1Q96PY6 1258 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 N4BP2Q86UW6 1770 aaPredicted RBP19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 CLCN6P51797 869 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 ISM2Q6H9L7 571 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 LRRN4CLQ8ND94 238 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 GOLPH3LQ9H4A5 285 aa19.78■□□□□ 0.76
PPP4R3A-202ENST00000554390 TIMM10P62072 90 aa19.77■□□□□ 0.76
PPP4R3A-202ENST00000554390 FMNL2Q96PY5 1086 aa19.77■□□□□ 0.76
PPP4R3A-202ENST00000554390 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.77■□□□□ 0.76
PPP4R3A-202ENST00000554390 ALDH1L1O75891 902 aa19.77■□□□□ 0.76
PPP4R3A-202ENST00000554390 KCNB2Q92953 911 aa19.77■□□□□ 0.76
PPP4R3A-202ENST00000554390 MARF1Q9Y4F3 1742 aaKnown RBP19.77■□□□□ 0.76
PPP4R3A-202ENST00000554390 NEURL1BA8MQ27 555 aa19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 TTLL5Q6EMB2 1281 aa19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 BECN2A8MW95 431 aa19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 KIF2AO00139 706 aaPredicted RBP19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 GOLIM4O00461 696 aa19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 PNMA6AP0CW24 399 aaPredicted RBP19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 PLA2G4AP47712 749 aa19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 ZNF496Q96IT1 587 aaPredicted RBP19.76■□□□□ 0.75
PPP4R3A-202ENST00000554390 HAND2P61296 217 aa19.75■□□□□ 0.75
PPP4R3A-202ENST00000554390 SNW1Q13573 536 aaKnown RBP19.75■□□□□ 0.75
PPP4R3A-202ENST00000554390 L2HGDHQ9H9P8 463 aa19.75■□□□□ 0.75
PPP4R3A-202ENST00000554390 NLRP2Q9NX02 1062 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms