RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ATG7O95352 703 aa8.11□□□□□ -1.11
VPS33B-203ENST00000554264 FAM50AQ14320 339 aaKnown RBP8.11□□□□□ -1.11
VPS33B-203ENST00000554264 WDR44Q5JSH3 913 aa8.11□□□□□ -1.11
VPS33B-203ENST00000554264 SLC9A9Q8IVB4 645 aa8.11□□□□□ -1.11
VPS33B-203ENST00000554264 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
VPS33B-203ENST00000554264 ZDHHC1Q8WTX9 485 aa8.11□□□□□ -1.11
VPS33B-203ENST00000554264 TSPAN10Q9H1Z9 355 aaPredicted RBP8.11□□□□□ -1.11
VPS33B-203ENST00000554264 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
VPS33B-203ENST00000554264 ADGRL3Q9HAR2 1447 aa8.11□□□□□ -1.11
VPS33B-203ENST00000554264 UNC13BO14795 1591 aa8.1□□□□□ -1.11
VPS33B-203ENST00000554264 H3BM21 787 aa8.1□□□□□ -1.11
VPS33B-203ENST00000554264 ANP32CO43423 234 aa8.1□□□□□ -1.11
VPS33B-203ENST00000554264 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
VPS33B-203ENST00000554264 ANP32EQ9BTT0 268 aa8.1□□□□□ -1.11
VPS33B-203ENST00000554264 TRPC5Q9UL62 973 aaPredicted RBP8.1□□□□□ -1.11
VPS33B-203ENST00000554264 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
VPS33B-203ENST00000554264 SETBP1Q9Y6X0 1596 aa8.1□□□□□ -1.11
VPS33B-203ENST00000554264 XRN1Q8IZH2 1706 aaKnown RBP8.09□□□□□ -1.11
VPS33B-203ENST00000554264 ERBB4Q15303 1308 aa8.09□□□□□ -1.11
VPS33B-203ENST00000554264 E9PCH4 1651 aa8.09□□□□□ -1.11
VPS33B-203ENST00000554264 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
VPS33B-203ENST00000554264 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
VPS33B-203ENST00000554264 GNASQ5JWF2 1037 aa8.09□□□□□ -1.11
VPS33B-203ENST00000554264 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
VPS33B-203ENST00000554264 TIMMDC1Q9NPL8 285 aa8.09□□□□□ -1.11
VPS33B-203ENST00000554264 USP21Q9UK80 565 aa8.09□□□□□ -1.11
VPS33B-203ENST00000554264 TONSLQ96HA7 1378 aa8.09□□□□□ -1.12
VPS33B-203ENST00000554264 THBS1P07996 1170 aa8.08□□□□□ -1.12
VPS33B-203ENST00000554264 FAM200AQ8TCP9 573 aa8.08□□□□□ -1.12
VPS33B-203ENST00000554264 DDX17Q92841 729 aaKnown RBP8.08□□□□□ -1.12
VPS33B-203ENST00000554264 NIFKQ9BYG3 293 aaKnown RBP8.08□□□□□ -1.12
VPS33B-203ENST00000554264 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
VPS33B-203ENST00000554264 PTCH1Q13635 1447 aa8.08□□□□□ -1.12
VPS33B-203ENST00000554264 METP08581 1390 aa8.08□□□□□ -1.12
VPS33B-203ENST00000554264 ROCK1Q13464 1354 aa8.08□□□□□ -1.12
VPS33B-203ENST00000554264 IQGAP3Q86VI3 1631 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 C1orf167Q5SNV9 1468 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 ITGA6P23229 1130 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 DBN1Q16643 649 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 ZNF326Q5BKZ1 582 aaKnown RBP8.07□□□□□ -1.12
VPS33B-203ENST00000554264 TMEM164Q5U3C3 297 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 NPAS3Q8IXF0 933 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 GPR161Q8N6U8 529 aaKnown RBP8.07□□□□□ -1.12
VPS33B-203ENST00000554264 GAS2L1Q99501 681 aaPredicted RBP8.07□□□□□ -1.12
VPS33B-203ENST00000554264 CABP1Q9NZU7 370 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 RBM19Q9Y4C8 960 aaKnown RBP8.07□□□□□ -1.12
VPS33B-203ENST00000554264 NUP155O75694 1391 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 NRXN3Q9Y4C0 1643 aa8.07□□□□□ -1.12
VPS33B-203ENST00000554264 ATRNO75882 1429 aa8.06□□□□□ -1.12
VPS33B-203ENST00000554264 MSX1P28360 303 aa8.06□□□□□ -1.12
VPS33B-203ENST00000554264 TEAD4Q15561 434 aa8.06□□□□□ -1.12
VPS33B-203ENST00000554264 KLRG1Q96E93 195 aa8.06□□□□□ -1.12
VPS33B-203ENST00000554264 HINFPQ9BQA5 517 aa8.06□□□□□ -1.12
VPS33B-203ENST00000554264 LAMC1P11047 1609 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 EML1O00423 815 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 WFS1O76024 890 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 F11P03951 625 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
VPS33B-203ENST00000554264 NOS2P35228 1153 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 TXLNAP40222 546 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 VWA5B2Q8N398 1253 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 C7orf43Q8WVR3 580 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 SCG3Q8WXD2 468 aaKnown RBP8.05□□□□□ -1.12
VPS33B-203ENST00000554264 NANOS1Q8WY41 292 aaKnown RBP8.05□□□□□ -1.12
VPS33B-203ENST00000554264 L3MBTL2Q969R5 705 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 GPAMQ9HCL2 828 aa8.05□□□□□ -1.12
VPS33B-203ENST00000554264 CARNS1A5YM72 827 aa8.04□□□□□ -1.12
VPS33B-203ENST00000554264 ATP4AP20648 1035 aa8.04□□□□□ -1.12
VPS33B-203ENST00000554264 WEE1P30291 646 aa8.04□□□□□ -1.12
VPS33B-203ENST00000554264 AIDAQ96BJ3 306 aa8.04□□□□□ -1.12
VPS33B-203ENST00000554264 NALCNQ8IZF0 1738 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 A0A1B0GTH6 734 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 VSIG8P0DPA2 414 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 RIPOR1Q6ZS17 1223 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 ZNF837Q96EG3 531 aaPredicted RBP8.03□□□□□ -1.12
VPS33B-203ENST00000554264 PRIMPOLQ96LW4 560 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 ORAI2Q96SN7 254 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 RUBCNLQ9H714 662 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 NPHP3Q7Z494 1330 aa8.03□□□□□ -1.12
VPS33B-203ENST00000554264 MYOM2P54296 1465 aa8.02□□□□□ -1.13
VPS33B-203ENST00000554264 BCL9LQ86UU0 1499 aa8.02□□□□□ -1.13
VPS33B-203ENST00000554264 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
VPS33B-203ENST00000554264 PPP1R12BO60237 982 aaPredicted RBP8.02□□□□□ -1.13
VPS33B-203ENST00000554264 PSMA6P60900 246 aaKnown RBP8.02□□□□□ -1.13
VPS33B-203ENST00000554264 UBAP2LQ14157 1087 aaKnown RBP8.02□□□□□ -1.13
VPS33B-203ENST00000554264 TRIM22Q8IYM9 498 aa8.02□□□□□ -1.13
VPS33B-203ENST00000554264 C2orf49Q9BVC5 232 aaPredicted RBP8.02□□□□□ -1.13
VPS33B-203ENST00000554264 HCN4Q9Y3Q4 1203 aa8.02□□□□□ -1.13
VPS33B-203ENST00000554264 COL22A1Q8NFW1 1626 aaPredicted RBP8.02□□□□□ -1.13
VPS33B-203ENST00000554264 SRCAPQ6ZRS2 3230 aa8.02□□□□□ -1.13
VPS33B-203ENST00000554264 BLMP54132 1417 aaPredicted RBP8.02□□□□□ -1.13
VPS33B-203ENST00000554264 PRAG1Q86YV5 1406 aa8.02□□□□□ -1.13
VPS33B-203ENST00000554264 ROBO2Q9HCK4 1378 aa8.01□□□□□ -1.13
VPS33B-203ENST00000554264 CDC14CA4D256 554 aa8.01□□□□□ -1.13
VPS33B-203ENST00000554264 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
VPS33B-203ENST00000554264 GMPRP36959 345 aa8.01□□□□□ -1.13
VPS33B-203ENST00000554264 ITGAEP38570 1179 aa8.01□□□□□ -1.13
VPS33B-203ENST00000554264 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms