RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L10C9JJH3 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L12C9JPN9 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L21D6R901 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 MMP20O60882 483 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 MED26O95402 600 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 SOX18P35713 384 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 ACAD11Q709F0 780 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 TREML1Q86YW5 311 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 ANKMY2Q8IV38 441 aa8.09□□□□□ -1.11
USP44-207ENST00000552237 UTP4Q969X6 686 aaKnown RBP8.09□□□□□ -1.11
USP44-207ENST00000552237 NFIAQ12857 509 aa8.08□□□□□ -1.12
USP44-207ENST00000552237 INTS5Q6P9B9 1019 aaKnown RBP8.08□□□□□ -1.12
USP44-207ENST00000552237 MYO19Q96H55 970 aa8.08□□□□□ -1.12
USP44-207ENST00000552237 UBL7Q96S82 380 aaPredicted RBP8.08□□□□□ -1.12
USP44-207ENST00000552237 LINC01387J3KSC0 135 aa8.07□□□□□ -1.12
USP44-207ENST00000552237 OPLAHO14841 1288 aa8.07□□□□□ -1.12
USP44-207ENST00000552237 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
USP44-207ENST00000552237 UVSSAQ2YD98 709 aa8.06□□□□□ -1.12
USP44-207ENST00000552237 ZDHHC13Q8IUH4 622 aa8.06□□□□□ -1.12
USP44-207ENST00000552237 SPACA7Q96KW9 195 aa8.06□□□□□ -1.12
USP44-207ENST00000552237 HOXD8P13378 290 aaPredicted RBP8.05□□□□□ -1.12
USP44-207ENST00000552237 WEE1P30291 646 aa8.05□□□□□ -1.12
USP44-207ENST00000552237 CD68P34810 354 aaPredicted RBP8.05□□□□□ -1.12
USP44-207ENST00000552237 TXNDC11Q6PKC3 985 aa8.05□□□□□ -1.12
USP44-207ENST00000552237 DBNDD2Q9BQY9 259 aa8.05□□□□□ -1.12
USP44-207ENST00000552237 LACRTQ9GZZ8 138 aa8.05□□□□□ -1.12
USP44-207ENST00000552237 C7orf69Q9H7B7 122 aa8.05□□□□□ -1.12
USP44-207ENST00000552237 FAM177BA6PVY3 158 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 WISP1O95388 367 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 CDC25BP30305 580 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 FAM117BQ6P1L5 589 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 NLRP13Q86W25 1043 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 TRIM42Q8IWZ5 723 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 ARMC10Q8N2F6 343 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 GALNT11Q8NCW6 608 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 LRFN2Q9ULH4 789 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 KCNMB2Q9Y691 235 aa8.04□□□□□ -1.12
USP44-207ENST00000552237 SMNDC1O75940 238 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP44-207ENST00000552237 WNT11O96014 354 aa8.03□□□□□ -1.12
USP44-207ENST00000552237 SPINK2P20155 84 aa8.03□□□□□ -1.12
USP44-207ENST00000552237 KANK4Q5T7N3 995 aaPredicted RBP8.03□□□□□ -1.12
USP44-207ENST00000552237 CEP135Q66GS9 1140 aa8.03□□□□□ -1.12
USP44-207ENST00000552237 RNF43Q68DV7 783 aa8.03□□□□□ -1.12
USP44-207ENST00000552237 HMX2A2RU54 273 aa8.02□□□□□ -1.13
USP44-207ENST00000552237 SART1O43290 800 aaKnown RBP8.02□□□□□ -1.13
USP44-207ENST00000552237 CDC27P30260 824 aa8.02□□□□□ -1.13
USP44-207ENST00000552237 DUOXA2Q1HG44 320 aa8.02□□□□□ -1.13
USP44-207ENST00000552237 CALR3Q96L12 384 aaKnown RBP8.02□□□□□ -1.13
USP44-207ENST00000552237 MYRFLQ96LU7 910 aa8.02□□□□□ -1.13
USP44-207ENST00000552237 CARD10Q9BWT7 1032 aa8.02□□□□□ -1.13
USP44-207ENST00000552237 PPP1R12CQ9BZL4 782 aa8.02□□□□□ -1.13
USP44-207ENST00000552237 KCNF1Q9H3M0 494 aa8.02□□□□□ -1.13
USP44-207ENST00000552237 HYAL2Q12891 473 aa8.01□□□□□ -1.13
USP44-207ENST00000552237 UBAP1LF5GYI3 381 aa8□□□□□ -1.13
USP44-207ENST00000552237 LMOD1P29536 600 aaPredicted RBP8□□□□□ -1.13
USP44-207ENST00000552237 ATP11AP98196 1134 aa8□□□□□ -1.13
USP44-207ENST00000552237 FZD5Q13467 585 aa8□□□□□ -1.13
USP44-207ENST00000552237 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
USP44-207ENST00000552237 DTX1Q86Y01 620 aa8□□□□□ -1.13
USP44-207ENST00000552237 KLHL23Q8NBE8 558 aa8□□□□□ -1.13
USP44-207ENST00000552237 FAM46AQ96IP4 442 aaKnown RBP8□□□□□ -1.13
USP44-207ENST00000552237 ADAMTS4O75173 837 aa7.99□□□□□ -1.13
USP44-207ENST00000552237 SCNN1AP37088 669 aa7.99□□□□□ -1.13
USP44-207ENST00000552237 OR13H1Q8NG92 308 aa7.99□□□□□ -1.13
USP44-207ENST00000552237 FAM200AQ8TCP9 573 aa7.99□□□□□ -1.13
USP44-207ENST00000552237 FAM13BQ9NYF5 915 aa7.99□□□□□ -1.13
USP44-207ENST00000552237 KCNK4Q9NYG8 393 aa7.99□□□□□ -1.13
USP44-207ENST00000552237 FSCN2O14926 492 aa7.98□□□□□ -1.13
USP44-207ENST00000552237 BRD2P25440 801 aaKnown RBP7.98□□□□□ -1.13
USP44-207ENST00000552237 TRIP4Q15650 581 aaPredicted RBP7.98□□□□□ -1.13
USP44-207ENST00000552237 COX20Q5RI15 118 aa7.98□□□□□ -1.13
USP44-207ENST00000552237 TTC39BQ5VTQ0 682 aaPredicted RBP7.98□□□□□ -1.13
USP44-207ENST00000552237 KIAA1211Q6ZU35 1233 aa7.98□□□□□ -1.13
USP44-207ENST00000552237 CLEC10AQ8IUN9 316 aa7.98□□□□□ -1.13
USP44-207ENST00000552237 SHKBP1Q8TBC3 707 aa7.98□□□□□ -1.13
USP44-207ENST00000552237 PIK3R5Q8WYR1 880 aa7.98□□□□□ -1.13
USP44-207ENST00000552237 ARXQ96QS3 562 aa7.98□□□□□ -1.13
USP44-207ENST00000552237 PRR19A6NJB7 356 aa7.97□□□□□ -1.13
USP44-207ENST00000552237 BMP3P12645 472 aa7.97□□□□□ -1.13
USP44-207ENST00000552237 BEND4Q6ZU67 534 aa7.97□□□□□ -1.13
USP44-207ENST00000552237 FAM20CQ8IXL6 584 aa7.97□□□□□ -1.13
USP44-207ENST00000552237 CLUAP1Q96AJ1 413 aa7.97□□□□□ -1.13
USP44-207ENST00000552237 ANGEL1Q9UNK9 670 aaKnown RBP7.97□□□□□ -1.13
USP44-207ENST00000552237 A6NJR5 290 aa7.96□□□□□ -1.14
USP44-207ENST00000552237 FKBP5Q13451 457 aaPredicted RBP7.96□□□□□ -1.14
USP44-207ENST00000552237 ETFBKMTQ8IXQ9 262 aa7.96□□□□□ -1.14
USP44-207ENST00000552237 GIMAP7Q8NHV1 300 aa7.96□□□□□ -1.14
USP44-207ENST00000552237 UBASH3BQ8TF42 649 aa7.96□□□□□ -1.14
USP44-207ENST00000552237 FAM83CQ9BQN1 747 aa7.96□□□□□ -1.14
USP44-207ENST00000552237 RASSF4Q9H2L5 321 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms