RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	IGFLR1	Q9H665	355 aa		5.2	□□□□□ -1.58
CUL3-215	ENST00000546102	TOPBP1	Q92547	1522 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	ELN	P15502	786 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	ECM1	Q16610	540 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	EAPP	Q56P03	285 aa	Predicted RBP	5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	C8orf86	Q6ZUL3	223 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	PNMA5	Q96PV4	448 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	MDFI	Q99750	246 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	BCL11A	Q9H165	835 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	JPH1	Q9HDC5	661 aa	Predicted RBP	5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	USP21	Q9UK80	565 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	ERCC6	Q03468	1493 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	FGD5	Q6ZNL6	1462 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	MRC2	Q9UBG0	1479 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	KIF21B	O75037	1637 aa		5.19	□□□□□ -1.58
CUL3-215	ENST00000546102	SOGA1	O94964	1423 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	H2AFB1	P0C5Y9	115 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	H2AFB2	P0C5Z0	115 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	NID1	P14543	1247 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	ERCC5	P28715	1186 aa	Predicted RBP	5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	ARHGAP4	P98171	946 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	FKBP4	Q02790	459 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	CAPN12	Q6ZSI9	719 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	TXNRD3	Q86VQ6	643 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	PHACTR1	Q9C0D0	580 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	EFCC1	Q9HA90	598 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	STARD13	Q9Y3M8	1113 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	HCN4	Q9Y3Q4	1203 aa		5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	URB2	Q14146	1524 aa	Known RBP	5.18	□□□□□ -1.58
CUL3-215	ENST00000546102	KIF27	Q86VH2	1401 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	SMARCA5	O60264	1052 aa	Predicted RBP	5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	EPHA4	P54764	986 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	KCNQ4	P56696	695 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	SF3B2	Q13435	895 aa	Known RBP	5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	ADGRE1	Q14246	886 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	COL19A1	Q14993	1142 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	RGL4	Q8IZJ4	473 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	GAS2L2	Q8NHY3	880 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	UBXN4	Q92575	508 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	TP53INP1	Q96A56	240 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	HSH2D	Q96JZ2	352 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	POLA1	P09884	1462 aa	Predicted RBP	5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	GOLGA3	Q08378	1498 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	WDR62	O43379	1518 aa		5.17	□□□□□ -1.58
CUL3-215	ENST00000546102	WDR97	A6NE52	1622 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102		A0A0A0MRY4	1105 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	PPP1R12B	O60237	982 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	P4HB	P07237	508 aa	Known RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	HIRA	P54198	1017 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	FKBP5	Q13451	457 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	COL9A3	Q14050	684 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	LRP8	Q14114	963 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	MBTPS1	Q14703	1052 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	NAA30	Q147X3	362 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	SF3A1	Q15459	793 aa	Known RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	PCSK7	Q16549	785 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	SH3PXD2A	Q5TCZ1	1133 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	C9orf131	Q5VYM1	1079 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	TSEN2	Q8NCE0	465 aa	Known RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	NUDT8	Q8WV74	236 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	LENG1	Q96BZ8	264 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	SUSD3	Q96L08	255 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	BACH2	Q9BYV9	841 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	ERICH3	Q5RHP9	1530 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	ABCA10	Q8WWZ4	1543 aa		5.16	□□□□□ -1.58
CUL3-215	ENST00000546102	CUX2	O14529	1486 aa		5.15	□□□□□ -1.58
CUL3-215	ENST00000546102		M0R2N6	131 aa		5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	PTCD1	O75127	700 aa	Known RBP	5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	RGS9	O75916	674 aa	Predicted RBP	5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	EPB42	P16452	691 aa		5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	WEE1	P30291	646 aa		5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	HDLBP	Q00341	1268 aa	Known RBP	5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	TYRO3	Q06418	890 aa		5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	C20orf204	Q6ZNR8	217 aa		5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	SLC6A14	Q9UN76	642 aa		5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	THOC2	Q8NI27	1593 aa	Known RBP	5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	CUL7	Q14999	1698 aa		5.15	□□□□□ -1.59
CUL3-215	ENST00000546102	SCAMP3	O14828	347 aa	Known RBP	5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	MRPL58	Q14197	206 aa	Known RBP	5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	PSAPL1	Q6NUJ1	521 aa		5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	FOXD4L3	Q6VB84	417 aa	Predicted RBP	5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	TMC7	Q7Z402	723 aa		5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	ALDH16A1	Q8IZ83	802 aa		5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	HELQ	Q8TDG4	1101 aa		5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	SPATA32	Q96LK8	384 aa		5.14	□□□□□ -1.59
CUL3-215	ENST00000546102	RUSC2	Q8N2Y8	1516 aa		5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	ABCA5	Q8WWZ7	1642 aa		5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	PPM1G	O15355	546 aa	Predicted RBP	5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	SELP	P16109	830 aa		5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	BTLA	Q7Z6A9	289 aa		5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	DMRTC2	Q8IXT2	367 aa	Predicted RBP	5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	ZNF280C	Q8ND82	737 aa		5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	CHMP7	Q8WUX9	453 aa	Predicted RBP	5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	C7orf43	Q8WVR3	580 aa		5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	NGLY1	Q96IV0	654 aa		5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	DNAJB12	Q9NXW2	375 aa	Known RBP	5.13	□□□□□ -1.59
CUL3-215	ENST00000546102	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.13	□□□□□ -1.59

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