RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 LARGE2Q8N3Y3 721 aa8.45□□□□□ -1.06
CDCA3-209ENST00000544610 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
CDCA3-209ENST00000544610 DDX21Q9NR30 783 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDCA3-209ENST00000544610 WDR33Q9C0J8 1336 aaKnown RBP8.45□□□□□ -1.06
CDCA3-209ENST00000544610 HSPA8P11142 646 aaKnown RBP8.44□□□□□ -1.06
CDCA3-209ENST00000544610 EPS15P42566 896 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 LBX1P52954 281 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 MAP2K1Q02750 393 aaPredicted RBP8.44□□□□□ -1.06
CDCA3-209ENST00000544610 PDIA6Q15084 440 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 SLC10A5Q5PT55 438 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 NIM1KQ8IY84 436 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 NLRP3Q96P20 1036 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 VPS33BQ9H267 617 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 ABT1Q9ULW3 272 aaKnown RBP8.44□□□□□ -1.06
CDCA3-209ENST00000544610 ATP6V0A2Q9Y487 856 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 ABCC4O15439 1325 aa8.44□□□□□ -1.06
CDCA3-209ENST00000544610 CHL1O00533 1208 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 TCERG1O14776 1098 aaKnown RBP8.43□□□□□ -1.06
CDCA3-209ENST00000544610 PPIP5K2O43314 1243 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
CDCA3-209ENST00000544610 AOC3Q16853 763 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 ERICH6BQ5W0A0 696 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 UTP14AQ9BVJ6 771 aaKnown RBP8.43□□□□□ -1.06
CDCA3-209ENST00000544610 RTFDC1Q9BY42 306 aaPredicted RBP8.43□□□□□ -1.06
CDCA3-209ENST00000544610 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 GPRC5DQ9NZD1 345 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 TSPYL4Q9UJ04 414 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 ANKRD36CQ5JPF3 1778 aa8.43□□□□□ -1.06
CDCA3-209ENST00000544610 TRAF5O00463 557 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 HOXB7P09629 217 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 CHRM1P11229 460 aaPredicted RBP8.42□□□□□ -1.06
CDCA3-209ENST00000544610 ECE1P42892 770 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
CDCA3-209ENST00000544610 PROSER3Q2NL68 480 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 CST9Q5W186 159 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 SLAIN1Q8ND83 568 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 SUPT20HQ8NEM7 779 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 CAPNS2Q96L46 248 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 TMX4Q9H1E5 349 aaPredicted RBP8.42□□□□□ -1.06
CDCA3-209ENST00000544610 ADARB2Q9NS39 739 aaKnown RBP8.42□□□□□ -1.06
CDCA3-209ENST00000544610 ZNRF3Q9ULT6 936 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 CDHR2Q9BYE9 1310 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 DUOX1Q9NRD9 1551 aa8.42□□□□□ -1.06
CDCA3-209ENST00000544610 LAMB2P55268 1798 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 LRRC37AA6NMS7 1700 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 BBOX1O75936 387 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 ANXA1P04083 346 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 EIF2S2P20042 333 aaKnown RBP8.41□□□□□ -1.06
CDCA3-209ENST00000544610 CXCL9Q07325 125 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 HSP90AB3PQ58FF7 597 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 NLRP10Q86W26 655 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 SP8Q8IXZ3 490 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 TLL2Q9Y6L7 1015 aa8.41□□□□□ -1.06
CDCA3-209ENST00000544610 SH3TC1Q8TE82 1336 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 FANCIQ9NVI1 1328 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 SEC24BO95487 1268 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 GMPSP49915 693 aaPredicted RBP8.4□□□□□ -1.06
CDCA3-209ENST00000544610 KIAA2012Q0VF49 1180 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 GRAPQ13588 217 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 ALDH1L2Q3SY69 923 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 CYP4F22Q6NT55 531 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 DPP8Q6V1X1 898 aaPredicted RBP8.4□□□□□ -1.06
CDCA3-209ENST00000544610 COPS6Q7L5N1 327 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 GRAPLQ8TC17 118 aaPredicted RBP8.4□□□□□ -1.06
CDCA3-209ENST00000544610 CDCA7LQ96GN5 454 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 ABHD8Q96I13 439 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 GPR101Q96P66 508 aaPredicted RBP8.4□□□□□ -1.06
CDCA3-209ENST00000544610 PGAP2Q9UHJ9 254 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 RCAN3Q9UKA8 241 aa8.4□□□□□ -1.06
CDCA3-209ENST00000544610 CACNA1FO60840 1977 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 TRPM7Q96QT4 1865 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 HCLS1P14317 486 aaPredicted RBP8.39□□□□□ -1.07
CDCA3-209ENST00000544610 MAP2K2P36507 400 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 TCIRG1Q13488 830 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 CIAPIN1Q6FI81 312 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 DDX46Q7L014 1031 aaKnown RBP8.39□□□□□ -1.07
CDCA3-209ENST00000544610 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 SAPCD2Q86UD0 394 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 MPNDQ8N594 471 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
CDCA3-209ENST00000544610 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
CDCA3-209ENST00000544610 HHIPL1Q96JK4 782 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 BEGAINQ9BUH8 593 aa8.39□□□□□ -1.07
CDCA3-209ENST00000544610 DDX60Q8IY21 1712 aaKnown RBP8.38□□□□□ -1.07
CDCA3-209ENST00000544610 YDJCA8MPS7 323 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 AOC2O75106 756 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 RAD17O75943 681 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 CELF2O95319 508 aaKnown RBP8.38□□□□□ -1.07
CDCA3-209ENST00000544610 MS4A1P11836 297 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 HIRAP54198 1017 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-209ENST00000544610 AIMP1Q12904 312 aaKnown RBP8.38□□□□□ -1.07
CDCA3-209ENST00000544610 GRM1Q13255 1194 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 AAMPQ13685 434 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 TNIP1Q15025 636 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 KCNV2Q8TDN2 545 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
CDCA3-209ENST00000544610 BCL2L13Q9BXK5 485 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms