RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 COL19A1Q14993 1142 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 NUTM2GQ5VZR2 741 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 CAPN12Q6ZSI9 719 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 FBXO33Q7Z6M2 555 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 ZNF784Q8NCA9 323 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-222ENST00000544585 VTI1AQ96AJ9 217 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 CDK19Q9BWU1 502 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 ADGRB2O60241 1585 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 BACH1O14867 736 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 ZBTB24O43167 697 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-222ENST00000544585 FAM13AO94988 1023 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 GCP02774 474 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 ECM1Q16610 540 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 EAPPQ56P03 285 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-222ENST00000544585 VASH1Q7L8A9 365 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-222ENST00000544585 HELQQ8TDG4 1101 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
CPSF7-222ENST00000544585 SYT17Q9BSW7 474 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 ACEP12821 1306 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
CPSF7-222ENST00000544585 DDB1Q16531 1140 aa8.68□□□□□ -1.02
CPSF7-222ENST00000544585 RGL4Q8IZJ4 473 aa8.68□□□□□ -1.02
CPSF7-222ENST00000544585 SCG3Q8WXD2 468 aaKnown RBP8.68□□□□□ -1.02
CPSF7-222ENST00000544585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.68□□□□□ -1.02
CPSF7-222ENST00000544585 SSH2Q76I76 1423 aa8.68□□□□□ -1.02
CPSF7-222ENST00000544585 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
CPSF7-222ENST00000544585 ERVH48-1M5A8F1 160 aa8.67□□□□□ -1.02
CPSF7-222ENST00000544585 CPDO75976 1380 aa8.67□□□□□ -1.02
CPSF7-222ENST00000544585 VARSP26640 1264 aaKnown RBP8.67□□□□□ -1.02
CPSF7-222ENST00000544585 SCTRP47872 440 aa8.67□□□□□ -1.02
CPSF7-222ENST00000544585 C1QTNF8P60827 252 aa8.67□□□□□ -1.02
CPSF7-222ENST00000544585 INTS6LQ5JSJ4 861 aaKnown RBP8.67□□□□□ -1.02
CPSF7-222ENST00000544585 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
CPSF7-222ENST00000544585 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
CPSF7-222ENST00000544585 STK32BQ9NY57 414 aa8.67□□□□□ -1.02
CPSF7-222ENST00000544585 IFT172Q9UG01 1749 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 TULP4Q9NRJ4 1543 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 TMEM229AB2RXF0 380 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 PTPN5P54829 565 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 TAGLNQ01995 201 aaKnown RBP8.66□□□□□ -1.02
CPSF7-222ENST00000544585 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 MAP4K5Q9Y4K4 846 aa8.66□□□□□ -1.02
CPSF7-222ENST00000544585 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-222ENST00000544585 ALS2Q96Q42 1657 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 ATP7BP35670 1465 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-222ENST00000544585 BRD4O60885 1362 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-222ENST00000544585 EXOC5O00471 708 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 NDUFB5O43674 189 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 GDF10P55107 478 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 ERVK-9P63128 1117 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 TOM1L2Q6ZVM7 507 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 FHDC1Q9C0D6 1143 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-222ENST00000544585 MTFR1LQ9H019 292 aa8.65□□□□□ -1.02
CPSF7-222ENST00000544585 ABCA3Q99758 1704 aa8.65□□□□□ -1.03
CPSF7-222ENST00000544585 TNS1Q9HBL0 1735 aaKnown RBP8.65□□□□□ -1.03
CPSF7-222ENST00000544585 OVOS2A0A0G2JMS6 1433 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 OVOS2A0A0J9YW53 1432 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 OVOS2Q6IE36 1432 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 USP19O94966 1318 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 NPR3P17342 541 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 RBCK1Q9BYM8 510 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 BRPF3Q9ULD4 1205 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 CAMTA1Q9Y6Y1 1673 aa8.64□□□□□ -1.03
CPSF7-222ENST00000544585 CRB1P82279 1406 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 SCNN1DP51172 638 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
CPSF7-222ENST00000544585 TRIM32Q13049 653 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 AAMPQ13685 434 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 ARID5BQ14865 1188 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 TSNAXIP1Q2TAA8 658 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 MARCH10Q8NA82 808 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-222ENST00000544585 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 PDGFDQ9GZP0 370 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-222ENST00000544585 SERTAD1Q9UHV2 236 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 BCL9O00512 1426 aa8.63□□□□□ -1.03
CPSF7-222ENST00000544585 AATKQ6ZMQ8 1374 aa8.62□□□□□ -1.03
CPSF7-222ENST00000544585 INHAP05111 366 aa8.62□□□□□ -1.03
CPSF7-222ENST00000544585 MPSTP25325 297 aa8.62□□□□□ -1.03
CPSF7-222ENST00000544585 C16orf46Q6P387 395 aa8.62□□□□□ -1.03
CPSF7-222ENST00000544585 TMC7Q7Z402 723 aa8.62□□□□□ -1.03
CPSF7-222ENST00000544585 TSPAN10Q9H1Z9 355 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-222ENST00000544585 OSBPL3Q9H4L5 887 aa8.62□□□□□ -1.03
CPSF7-222ENST00000544585 CYLDQ9NQC7 956 aa8.62□□□□□ -1.03
CPSF7-222ENST00000544585 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 PPP1R12BO60237 982 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-222ENST00000544585 RECKO95980 971 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 WNT7BP56706 349 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 GPR162Q16538 588 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 PTF1AQ7RTS3 328 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 KCNH5Q8NCM2 988 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 CARD10Q9BWT7 1032 aa8.61□□□□□ -1.03
CPSF7-222ENST00000544585 WDR17Q8IZU2 1322 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 RREB1Q92766 1687 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms