RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
DDB1-221ENST00000543162 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
DDB1-221ENST00000543162 SRGNP10124 158 aa13.11□□□□□ -0.31
DDB1-221ENST00000543162 NPR1P16066 1061 aa13.11□□□□□ -0.31
DDB1-221ENST00000543162 MX1P20591 662 aa13.11□□□□□ -0.31
DDB1-221ENST00000543162 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
DDB1-221ENST00000543162 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
DDB1-221ENST00000543162 AKAP2Q9Y2D5 859 aa13.11□□□□□ -0.31
DDB1-221ENST00000543162 COL4A1P02462 1669 aa13.11□□□□□ -0.31
DDB1-221ENST00000543162 H0YIN7 160 aa13.1□□□□□ -0.31
DDB1-221ENST00000543162 PDE1AP54750 535 aa13.1□□□□□ -0.31
DDB1-221ENST00000543162 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
DDB1-221ENST00000543162 GPATCH3Q96I76 525 aa13.1□□□□□ -0.31
DDB1-221ENST00000543162 CCDC8Q9H0W5 538 aaPredicted RBP13.1□□□□□ -0.31
DDB1-221ENST00000543162 C10orf71Q711Q0 1435 aa13.1□□□□□ -0.31
DDB1-221ENST00000543162 SALL3Q9BXA9 1300 aa13.1□□□□□ -0.31
DDB1-221ENST00000543162 ZNF609O15014 1411 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 BBOX1O75936 387 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 PDE8BO95263 885 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 CHRNDQ07001 517 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 VGLL2Q8N8G2 317 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
DDB1-221ENST00000543162 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 NEUROD6Q96NK8 337 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 MINPP1Q9UNW1 487 aa13.09□□□□□ -0.31
DDB1-221ENST00000543162 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
DDB1-221ENST00000543162 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 ALDH1B1P30837 517 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 TIMM10P62072 90 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 PUM3Q15397 648 aaKnown RBP13.08□□□□□ -0.32
DDB1-221ENST00000543162 STYK1Q6J9G0 422 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDB1-221ENST00000543162 ANKRD2Q9GZV1 360 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
DDB1-221ENST00000543162 AOX1Q06278 1338 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
DDB1-221ENST00000543162 TAF5LO75529 589 aa13.07□□□□□ -0.32
DDB1-221ENST00000543162 CHRNA5P30532 468 aa13.07□□□□□ -0.32
DDB1-221ENST00000543162 TSHZ3Q63HK5 1081 aa13.07□□□□□ -0.32
DDB1-221ENST00000543162 LPIN2Q92539 896 aa13.07□□□□□ -0.32
DDB1-221ENST00000543162 DBNDD2Q9BQY9 259 aa13.07□□□□□ -0.32
DDB1-221ENST00000543162 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
DDB1-221ENST00000543162 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
DDB1-221ENST00000543162 ERC2O15083 957 aa13.06□□□□□ -0.32
DDB1-221ENST00000543162 SLC5A1P13866 664 aa13.06□□□□□ -0.32
DDB1-221ENST00000543162 FGFR2P21802 821 aa13.06□□□□□ -0.32
DDB1-221ENST00000543162 GORABQ5T7V8 394 aa13.06□□□□□ -0.32
DDB1-221ENST00000543162 TTC22Q5TAA0 569 aa13.06□□□□□ -0.32
DDB1-221ENST00000543162 SGIP1Q9BQI5 828 aa13.06□□□□□ -0.32
DDB1-221ENST00000543162 A0A1B0GUL6 1792 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 GLRX3O76003 335 aaKnown RBP13.05□□□□□ -0.32
DDB1-221ENST00000543162 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
DDB1-221ENST00000543162 PTGER2P43116 358 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 KCNJ4P48050 445 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 BMP2KLQ5H9B9 411 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 XAGE2Q96GT9 111 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
DDB1-221ENST00000543162 SPON1Q9HCB6 807 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
DDB1-221ENST00000543162 ADORA1P30542 326 aa13.04□□□□□ -0.32
DDB1-221ENST00000543162 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
DDB1-221ENST00000543162 CCDC158Q5M9N0 1113 aa13.04□□□□□ -0.32
DDB1-221ENST00000543162 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
DDB1-221ENST00000543162 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
DDB1-221ENST00000543162 ATP6V0A2Q9Y487 856 aa13.04□□□□□ -0.32
DDB1-221ENST00000543162 XDHP47989 1333 aa13.04□□□□□ -0.32
DDB1-221ENST00000543162 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
DDB1-221ENST00000543162 SNAP23O00161 211 aa13.03□□□□□ -0.32
DDB1-221ENST00000543162 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
DDB1-221ENST00000543162 DPEP1P16444 411 aa13.03□□□□□ -0.32
DDB1-221ENST00000543162 ATP5JP18859 108 aa13.03□□□□□ -0.32
DDB1-221ENST00000543162 TGFB2P61812 414 aa13.03□□□□□ -0.32
DDB1-221ENST00000543162 GPSM2P81274 684 aa13.03□□□□□ -0.32
DDB1-221ENST00000543162 TTC39AQ5SRH9 613 aa13.03□□□□□ -0.32
DDB1-221ENST00000543162 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
DDB1-221ENST00000543162 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
DDB1-221ENST00000543162 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.32
DDB1-221ENST00000543162 ARAP2Q8WZ64 1704 aa13.02□□□□□ -0.32
DDB1-221ENST00000543162 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.32
DDB1-221ENST00000543162 CACNA1SQ13698 1873 aa13.02□□□□□ -0.32
DDB1-221ENST00000543162 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
DDB1-221ENST00000543162 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
DDB1-221ENST00000543162 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
DDB1-221ENST00000543162 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
DDB1-221ENST00000543162 LEMD3Q9Y2U8 911 aa13.02□□□□□ -0.33
DDB1-221ENST00000543162 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
DDB1-221ENST00000543162 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.33
DDB1-221ENST00000543162 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
DDB1-221ENST00000543162 SDSP20132 328 aa13.01□□□□□ -0.33
DDB1-221ENST00000543162 ATP2B4P23634 1241 aa13.01□□□□□ -0.33
DDB1-221ENST00000543162 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
DDB1-221ENST00000543162 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
DDB1-221ENST00000543162 BOLA2Q9H3K6 86 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms