RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PCDHGC4Q9Y5F7 938 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 AK5Q9Y6K8 562 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 GNB5O14775 395 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 PDGFAP04085 211 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 CTSHP09668 335 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 EPXP11678 715 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 ATP4AP20648 1035 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 GRIN2CQ14957 1233 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 ETFBKMTQ8IXQ9 262 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 NGLY1Q96IV0 654 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 NIFKQ9BYG3 293 aaKnown RBP5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 ZCCHC2Q9C0B9 1178 aaKnown RBP5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 DDX41Q9UJV9 622 aaKnown RBP5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 SPG7Q9UQ90 795 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 PCDHGB7Q9Y5F8 929 aa5.71□□□□□ -1.5
SFSWAP-211ENST00000542813 EIF4BP23588 611 aaKnown RBP5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 ZAP70P43403 619 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 RACK1P63244 317 aaKnown RBP5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 RBL2Q08999 1139 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 ORC1Q13415 861 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 SOGA3Q5TF21 947 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 SDE2Q6IQ49 451 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 POTEAQ6S8J7 498 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 USP48Q86UV5 1035 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 BTBD6Q96KE9 485 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 SUV39H2Q9H5I1 410 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 PIF1Q9H611 641 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 ZSWIM4Q9H7M6 989 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 NOP53Q9NZM5 478 aaKnown RBP5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 TBX22Q9Y458 520 aa5.7□□□□□ -1.5
SFSWAP-211ENST00000542813 NEURL1BA8MQ27 555 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 EIF1AYO14602 144 aaKnown RBP5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 ATXN7O15265 892 aaPredicted RBP5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 DGKGP49619 791 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 DGKZQ13574 1117 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 FAM182BQ5T319 152 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 HS2ST1Q7LGA3 356 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 VPS37DQ86XT2 251 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 KRTAP1-3Q8IUG1 177 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 AIDAQ96BJ3 306 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 USP3Q9Y6I4 520 aa5.69□□□□□ -1.5
SFSWAP-211ENST00000542813 A0A1W2PNR3 127 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 SERTM1A2A2V5 107 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 EML1O00423 815 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 CDK2AP1O14519 115 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 NEFLP07196 543 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 PCSK2P16519 638 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 ADH6P28332 368 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 HIRAP54198 1017 aaPredicted RBP5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 PTPN12Q05209 780 aaKnown RBP5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 RTN1Q16799 776 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 NBPF1Q3BBV0 1214 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 C11orf91Q3C1V1 193 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 MCF2L2Q86YR7 1114 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 OSBPL2Q9H1P3 480 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 DNAJC25Q9H1X3 360 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 AVENQ9NQS1 362 aaPredicted RBP5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 ZDHHC3Q9NYG2 299 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 GGT7Q9UJ14 662 aa5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.68□□□□□ -1.5
SFSWAP-211ENST00000542813 DCDC2BA2VCK2 349 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 STK10O94804 968 aaKnown RBP5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 FGRP09769 529 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 FURINP09958 794 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 MAPTP10636 758 aaKnown RBP5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 TATP17735 454 aaPredicted RBP5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 TNP2Q05952 138 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 ARSJQ5FYB0 599 aaPredicted RBP5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 SH3PXD2AQ5TCZ1 1133 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 EGFLAMQ63HQ2 1017 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 CHSY3Q70JA7 882 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 ALDH16A1Q8IZ83 802 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 ZNF295-AS1Q8N0V1 137 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 TTC16Q8NEE8 873 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 IFT43Q96FT9 208 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 CWC22Q9HCG8 908 aaKnown RBP5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 SRA1Q9HD15 236 aaKnown RBP5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 KLK14Q9P0G3 267 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 ZNF232Q9UNY5 417 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
SFSWAP-211ENST00000542813 C1QTNF9BB2RNN3 333 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 OPLAHO14841 1288 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 KHNYNO15037 678 aaKnown RBP5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 CPNE3O75131 537 aaKnown RBP5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 FAM157BP0CG42 384 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 CD33P20138 364 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 TEAD4Q15561 434 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 C8orf34Q49A92 452 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 CD163Q86VB7 1156 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 NLGN1Q8N2Q7 840 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 GPR152Q8TDT2 470 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 NUDT16Q96DE0 195 aaKnown RBP5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 C12orf49Q9H741 205 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 HCN4Q9Y3Q4 1203 aa5.66□□□□□ -1.5
SFSWAP-211ENST00000542813 NOS2P35228 1153 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 GJA8P48165 433 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 BMS1Q14692 1282 aaKnown RBP5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 ZNF746Q6NUN9 644 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms