RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 IGSF3O75054 1194 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 HOXB7P09629 217 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
VARS2-211ENST00000541562 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 TYRO3Q06418 890 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 MAP3K11Q16584 847 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 CCDC186Q7Z3E2 898 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 PGBD1Q96JS3 809 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 LEO1Q8WVC0 666 aaPredicted RBP17.74■□□□□ 0.43
VARS2-211ENST00000541562 M0R2C6 588 aa17.74■□□□□ 0.43
VARS2-211ENST00000541562 MTX1Q13505 466 aa17.74■□□□□ 0.43
VARS2-211ENST00000541562 CCDC57Q2TAC2 916 aa17.74■□□□□ 0.43
VARS2-211ENST00000541562 TTC39AQ5SRH9 613 aa17.74■□□□□ 0.43
VARS2-211ENST00000541562 ZCRB1Q8TBF4 217 aaKnown RBP17.74■□□□□ 0.43
VARS2-211ENST00000541562 BABAM1Q9NWV8 329 aa17.74■□□□□ 0.43
VARS2-211ENST00000541562 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
VARS2-211ENST00000541562 CCDC24Q8N4L8 307 aa17.74■□□□□ 0.43
VARS2-211ENST00000541562 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
VARS2-211ENST00000541562 SH2B1Q9NRF2 756 aaPredicted RBP17.74■□□□□ 0.43
VARS2-211ENST00000541562 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
VARS2-211ENST00000541562 TRMT1Q9NXH9 659 aaKnown RBP17.74■□□□□ 0.43
VARS2-211ENST00000541562 MEGF6O75095 1541 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 KDM6AO15550 1401 aaPredicted RBP17.73■□□□□ 0.43
VARS2-211ENST00000541562 A0A1B0GVL5 298 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 CCDC192P0DO97 292 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 NOLC1Q14978 699 aaKnown RBP eCLIP17.73■□□□□ 0.43
VARS2-211ENST00000541562 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.73■□□□□ 0.436e-8■■■■□ 19.5
VARS2-211ENST00000541562 V9GYY5 206 aaPredicted RBP17.73■□□□□ 0.43
VARS2-211ENST00000541562 ZNF609O15014 1411 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 ZAP70P43403 619 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 RFX5P48382 616 aaPredicted RBP17.73■□□□□ 0.43
VARS2-211ENST00000541562 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 CEP126Q9P2H0 1117 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 PTPDC1A2A3K4 754 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 OSBP2Q969R2 916 aa17.73■□□□□ 0.43
VARS2-211ENST00000541562 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
VARS2-211ENST00000541562 NAA30Q147X3 362 aaPredicted RBP17.72■□□□□ 0.43
VARS2-211ENST00000541562 SF3A1Q15459 793 aaKnown RBP17.72■□□□□ 0.43
VARS2-211ENST00000541562 SASS6Q6UVJ0 657 aa17.72■□□□□ 0.43
VARS2-211ENST00000541562 NKX2-3Q8TAU0 364 aa17.72■□□□□ 0.43
VARS2-211ENST00000541562 PIBF1Q8WXW3 757 aa17.72■□□□□ 0.43
VARS2-211ENST00000541562 LTN1O94822 1766 aa17.72■□□□□ 0.43
VARS2-211ENST00000541562 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
VARS2-211ENST00000541562 ZKSCAN3Q9BRR0 538 aa17.72■□□□□ 0.43
VARS2-211ENST00000541562 SPDYE4A6NLX3 237 aa17.71■□□□□ 0.43
VARS2-211ENST00000541562 HLFQ16534 295 aa17.71■□□□□ 0.43
VARS2-211ENST00000541562 SPECC1Q5M775 1068 aa17.71■□□□□ 0.43
VARS2-211ENST00000541562 CBX8Q9HC52 389 aa17.71■□□□□ 0.43
VARS2-211ENST00000541562 USP28Q96RU2 1077 aa17.71■□□□□ 0.43
VARS2-211ENST00000541562 CNNM1Q9NRU3 951 aa17.71■□□□□ 0.43
VARS2-211ENST00000541562 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 TOPAZ1Q8N9V7 1692 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 ANKARQ7Z5J8 1434 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 HSPD1P10809 573 aaKnown RBP17.7■□□□□ 0.42
VARS2-211ENST00000541562 ZNF165P49910 485 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
VARS2-211ENST00000541562 JAG2Q9Y219 1238 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 MRVI1Q9Y6F6 885 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 ATP5JP18859 108 aa17.7■□□□□ 0.42
VARS2-211ENST00000541562 PUS7LQ9H0K6 701 aaKnown RBP17.7■□□□□ 0.42
VARS2-211ENST00000541562 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
VARS2-211ENST00000541562 E7EWF7 191 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 FOXO4P98177 505 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 SDF4Q9BRK5 362 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 HIP1O00291 1037 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 ARHGAP23Q9P227 1491 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 PHKBQ93100 1093 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 CHMP4AQ9BY43 222 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 KCNF1Q9H3M0 494 aa17.69■□□□□ 0.42
VARS2-211ENST00000541562 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 GTF3C6Q969F1 213 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 SENP2Q9HC62 589 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
VARS2-211ENST00000541562 hCG_1642624A0A1W2PR95 340 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 WTIPA6NIX2 430 aaPredicted RBP17.68■□□□□ 0.42
VARS2-211ENST00000541562 CPLX1O14810 134 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 C11orf57Q6ZUT1 292 aaPredicted RBP17.68■□□□□ 0.42
VARS2-211ENST00000541562 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 KLF18A0A0U1RQI7 1052 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 BECN2A8MW95 431 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
VARS2-211ENST00000541562 MAST3O60307 1309 aa17.67■□□□□ 0.42
VARS2-211ENST00000541562 UTRNP46939 3433 aa17.67■□□□□ 0.42
VARS2-211ENST00000541562 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
VARS2-211ENST00000541562 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
VARS2-211ENST00000541562 GOLGA8BA8MQT2 603 aa17.67■□□□□ 0.42
VARS2-211ENST00000541562 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
VARS2-211ENST00000541562 FSIP1Q8NA03 581 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms