RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 TEX14Q8IWB6 1497 aa7.08□□□□□ -1.28
DDB1-219ENST00000541513 ITSN2Q9NZM3 1697 aa7.08□□□□□ -1.28
DDB1-219ENST00000541513 GIPC1O14908 333 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 KRT18P05783 430 aaKnown RBP7.07□□□□□ -1.28
DDB1-219ENST00000541513 COL6A1P12109 1028 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 CD53P19397 219 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 PMLP29590 882 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 ETFBP38117 255 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 USP5P45974 858 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 CDKN1CP49918 316 aaPredicted RBP7.07□□□□□ -1.28
DDB1-219ENST00000541513 ABTB2Q8N961 1025 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 ADAM32Q8TC27 787 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 PPM1EQ8WY54 764 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 SAP130Q9H0E3 1048 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 BCL2L12Q9HB09 334 aa7.07□□□□□ -1.28
DDB1-219ENST00000541513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.07□□□□□ -1.28
DDB1-219ENST00000541513 V9GY48 417 aaPredicted RBP7.07□□□□□ -1.28
DDB1-219ENST00000541513 NCOA2Q15596 1464 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 NEO1Q92859 1461 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 CFAP69A5D8W1 941 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 CCER2I3L3R5 266 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 MYL1P05976 194 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 MAN1A1P33908 653 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 SLC4A3P48751 1232 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 USP4Q13107 963 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 AAMPQ13685 434 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 TAF1CQ15572 869 aaPredicted RBP7.06□□□□□ -1.28
DDB1-219ENST00000541513 SWT1Q5T5J6 900 aaKnown RBP7.06□□□□□ -1.28
DDB1-219ENST00000541513 NBPF14Q5TI25 921 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.06□□□□□ -1.28
DDB1-219ENST00000541513 MPHOSPH6Q99547 160 aaKnown RBP7.06□□□□□ -1.28
DDB1-219ENST00000541513 ANAPC4Q9UJX5 808 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 ATP8A1Q9Y2Q0 1164 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 SCINQ9Y6U3 715 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 PLCH2O75038 1416 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 PHLDB1Q86UU1 1377 aa7.06□□□□□ -1.28
DDB1-219ENST00000541513 ALG1L2C9J202 215 aa7.05□□□□□ -1.28
DDB1-219ENST00000541513 SMAPO00193 183 aa7.05□□□□□ -1.28
DDB1-219ENST00000541513 SOX9P48436 509 aa7.05□□□□□ -1.28
DDB1-219ENST00000541513 NASPP49321 788 aaPredicted RBP7.05□□□□□ -1.28
DDB1-219ENST00000541513 WDR75Q8IWA0 830 aaKnown RBP7.05□□□□□ -1.28
DDB1-219ENST00000541513 SYNPOQ8N3V7 929 aa7.05□□□□□ -1.28
DDB1-219ENST00000541513 HNRNPLLQ8WVV9 542 aaKnown RBP7.05□□□□□ -1.28
DDB1-219ENST00000541513 CEP63Q96MT8 703 aa7.05□□□□□ -1.28
DDB1-219ENST00000541513 DNAJC25Q9H1X3 360 aa7.05□□□□□ -1.28
DDB1-219ENST00000541513 PRKAG3Q9UGI9 489 aa7.05□□□□□ -1.28
DDB1-219ENST00000541513 ALDH1L1O75891 902 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 POU3F3P20264 500 aaPredicted RBP7.04□□□□□ -1.28
DDB1-219ENST00000541513 SQSTM1Q13501 440 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
DDB1-219ENST00000541513 BRD3Q15059 726 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 PPP2R5AQ15172 486 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 MAPRE1Q15691 268 aaKnown RBP7.04□□□□□ -1.28
DDB1-219ENST00000541513 MORN1Q5T089 497 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
DDB1-219ENST00000541513 JMYQ8N9B5 988 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 FBXO41Q8TF61 875 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 DNAJC7Q99615 494 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 SPON2Q9BUD6 331 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 ZNF358Q9NW07 568 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 MAP3K20Q9NYL2 800 aaKnown RBP7.04□□□□□ -1.28
DDB1-219ENST00000541513 PLAAQ9Y263 795 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 GPATCH8Q9UKJ3 1502 aaKnown RBP7.04□□□□□ -1.28
DDB1-219ENST00000541513 FANCAO15360 1455 aa7.04□□□□□ -1.28
DDB1-219ENST00000541513 ARHGAP5Q13017 1502 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 FOSP01100 380 aaPredicted RBP7.03□□□□□ -1.28
DDB1-219ENST00000541513 CFHP08603 1231 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 RAPGEF1Q13905 1077 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 MYBPC2Q14324 1141 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 TTF1Q15361 905 aaPredicted RBP7.03□□□□□ -1.28
DDB1-219ENST00000541513 TKFCQ3LXA3 575 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 SYCP2LQ5T4T6 812 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 EFCAB2Q5VUJ9 269 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 ZNF280DQ6N043 979 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 FAM43BQ6ZT52 329 aaPredicted RBP7.03□□□□□ -1.28
DDB1-219ENST00000541513 JAMLQ86YT9 394 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 KIAA0825Q8IV33 1275 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 CNPY4Q8N129 248 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 STAC3Q96MF2 364 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 ARHGAP9Q9BRR9 750 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 CHST12Q9NRB3 414 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 ENAMQ9NRM1 1142 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 CCNB3Q8WWL7 1395 aa7.03□□□□□ -1.28
DDB1-219ENST00000541513 AKNAQ7Z591 1439 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 KDM6BO15054 1643 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 RICTORQ6R327 1708 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 POTECB2RU33 542 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 ZEB1P37275 1124 aaPredicted RBP7.02□□□□□ -1.29
DDB1-219ENST00000541513 RASGRF1Q13972 1273 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 TMEM95Q3KNT9 176 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 C2orf27AQ580R0 203 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 COX20Q5RI15 118 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 MEI1Q5TIA1 1274 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 STAG2Q8N3U4 1231 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
DDB1-219ENST00000541513 SCG3Q8WXD2 468 aaKnown RBP7.02□□□□□ -1.29
DDB1-219ENST00000541513 KCNK17Q96T54 332 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 ARPC5LQ9BPX5 153 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 COPRSQ9NQ92 184 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 POLIQ9UNA4 740 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms