RNA–Protein interactions for RNA: ENST00000541249.5

SCNN1A-216, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 432 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-216ENST00000541249 KCNQ5Q9NR82 932 aa13.99□□□□□ -0.17
SCNN1A-216ENST00000541249 TRIM17Q9Y577 477 aa13.99□□□□□ -0.17
SCNN1A-216ENST00000541249 TAF1P21675 1872 aa13.99□□□□□ -0.17
SCNN1A-216ENST00000541249 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
SCNN1A-216ENST00000541249 EN2P19622 333 aaPredicted RBP13.98□□□□□ -0.17
SCNN1A-216ENST00000541249 SCARF1Q14162 830 aa13.98□□□□□ -0.17
SCNN1A-216ENST00000541249 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
SCNN1A-216ENST00000541249 OTOP1Q7RTM1 612 aa13.98□□□□□ -0.17
SCNN1A-216ENST00000541249 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
SCNN1A-216ENST00000541249 VIL1P09327 827 aaKnown RBP13.97□□□□□ -0.17
SCNN1A-216ENST00000541249 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
SCNN1A-216ENST00000541249 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
SCNN1A-216ENST00000541249 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
SCNN1A-216ENST00000541249 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
SCNN1A-216ENST00000541249 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
SCNN1A-216ENST00000541249 CEP290O15078 2479 aa13.96□□□□□ -0.17
SCNN1A-216ENST00000541249 C6orf229H3BNL8 230 aa13.96□□□□□ -0.17
SCNN1A-216ENST00000541249 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.17
SCNN1A-216ENST00000541249 SCN9AQ15858 1988 aa13.96□□□□□ -0.18
SCNN1A-216ENST00000541249 PITPNM2Q9BZ72 1349 aa13.95□□□□□ -0.18
SCNN1A-216ENST00000541249 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
SCNN1A-216ENST00000541249 ZNF280AP59817 542 aaPredicted RBP13.95□□□□□ -0.18
SCNN1A-216ENST00000541249 TTLL12Q14166 644 aaPredicted RBP13.95□□□□□ -0.18
SCNN1A-216ENST00000541249 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
SCNN1A-216ENST00000541249 EYA3Q99504 573 aa13.95□□□□□ -0.18
SCNN1A-216ENST00000541249 POLLQ9UGP5 575 aa13.95□□□□□ -0.18
SCNN1A-216ENST00000541249 A0A0C4DFX4 3053 aa13.94□□□□□ -0.18
SCNN1A-216ENST00000541249 ALDH1A1P00352 501 aa13.94□□□□□ -0.18
SCNN1A-216ENST00000541249 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
SCNN1A-216ENST00000541249 ERBB4Q15303 1308 aa13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 H0YGN5 161 aa13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 GPSM2P81274 684 aa13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 AGBL3Q8NEM8 1001 aa13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 PTPN22Q9Y2R2 807 aa13.93□□□□□ -0.18
SCNN1A-216ENST00000541249 ZNF609O15014 1411 aa13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 EIF4A1P60842 406 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 PRAMEF18Q5VWM3 479 aa13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 NLRP10Q86W26 655 aa13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 MYOZ2Q9NPC6 264 aa13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 TRMT112Q9UI30 125 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-216ENST00000541249 SH3TC1Q8TE82 1336 aa13.91□□□□□ -0.18
SCNN1A-216ENST00000541249 CUL9Q8IWT3 2517 aa13.91□□□□□ -0.18
SCNN1A-216ENST00000541249 NF2P35240 595 aa13.91□□□□□ -0.18
SCNN1A-216ENST00000541249 RSBN1LQ6PCB5 846 aaPredicted RBP13.91□□□□□ -0.18
SCNN1A-216ENST00000541249 TBC1D16Q8TBP0 767 aa13.91□□□□□ -0.18
SCNN1A-216ENST00000541249 ERO1AQ96HE7 468 aa13.91□□□□□ -0.18
SCNN1A-216ENST00000541249 ZC3H12CQ9C0D7 883 aaKnown RBP13.91□□□□□ -0.18
SCNN1A-216ENST00000541249 COL6A3P12111 3177 aa13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 G3V3G9 751 aa13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 USP17L8P0C7I0 530 aa13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 PTPN12Q05209 780 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 HSP90AB3PQ58FF7 597 aa13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 CELF1Q92879 486 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 PSME4Q14997 1843 aa13.9□□□□□ -0.18
SCNN1A-216ENST00000541249 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 INHBEP58166 350 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 SPRYD7Q5W111 196 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 LRP10Q7Z4F1 713 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 CD99L2Q8TCZ2 262 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 GMLQ99445 158 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 EFCC1Q9HA90 598 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 RANBP2P49792 3224 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-216ENST00000541249 MANSC4A6NHS7 340 aaPredicted RBP13.88□□□□□ -0.19
SCNN1A-216ENST00000541249 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
SCNN1A-216ENST00000541249 ZNF333Q96JL9 665 aa13.88□□□□□ -0.19
SCNN1A-216ENST00000541249 PDIA6Q15084 440 aa13.87□□□□□ -0.19
SCNN1A-216ENST00000541249 NBPF9Q3BBW0 867 aa13.87□□□□□ -0.19
SCNN1A-216ENST00000541249 RBM27Q9P2N5 1060 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-216ENST00000541249 COL4A1P02462 1669 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 UFL1O94874 794 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 PRKG1Q13976 671 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 SF3B3Q15393 1217 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 SLC4A8Q2Y0W8 1093 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 LDLRAD1Q5T700 205 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
SCNN1A-216ENST00000541249 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCNN1A-216ENST00000541249 ANXA1P04083 346 aa13.85□□□□□ -0.19
SCNN1A-216ENST00000541249 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
SCNN1A-216ENST00000541249 DLG5Q8TDM6 1919 aa13.85□□□□□ -0.19
SCNN1A-216ENST00000541249 LAMB1P07942 1786 aa13.84□□□□□ -0.19
SCNN1A-216ENST00000541249 USP17L3A6NCW0 530 aa13.84□□□□□ -0.19
SCNN1A-216ENST00000541249 USP17L4A6NCW7 530 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms