RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF165P49910 485 aa14.5□□□□□ -0.09
NPC1-202ENST00000540608 TFCP2Q12800 502 aa14.5□□□□□ -0.09
NPC1-202ENST00000540608 MCMDC2Q4G0Z9 681 aa14.5□□□□□ -0.09
NPC1-202ENST00000540608 DRC7Q8IY82 874 aa14.5□□□□□ -0.09
NPC1-202ENST00000540608 TRIM5Q9C035 493 aa14.5□□□□□ -0.09
NPC1-202ENST00000540608 H3BQV1 296 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 TATP17735 454 aaPredicted RBP14.49□□□□□ -0.09
NPC1-202ENST00000540608 IFFO2Q5TF58 517 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 ANKRD13DQ6ZTN6 518 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 LLPHQ9BRT6 129 aaKnown RBP14.49□□□□□ -0.09
NPC1-202ENST00000540608 FAM177BA6PVY3 158 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 CTIFO43310 598 aaKnown RBP14.49□□□□□ -0.09
NPC1-202ENST00000540608 CYP21A2P08686 494 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 RABL6Q3YEC7 729 aaPredicted RBP14.49□□□□□ -0.09
NPC1-202ENST00000540608 SMARCC2Q8TAQ2 1214 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 HAUS7Q99871 368 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 USP16Q9Y5T5 823 aa14.49□□□□□ -0.09
NPC1-202ENST00000540608 ZNF609O15014 1411 aa14.48□□□□□ -0.09
NPC1-202ENST00000540608 HSP90B1P14625 803 aaKnown RBP14.48□□□□□ -0.09
NPC1-202ENST00000540608 LRP10Q7Z4F1 713 aa14.48□□□□□ -0.09
NPC1-202ENST00000540608 CABLES1Q8TDN4 633 aa14.48□□□□□ -0.09
NPC1-202ENST00000540608 ZSCAN25Q6NSZ9 544 aa14.48□□□□□ -0.09
NPC1-202ENST00000540608 DNAJC25Q9H1X3 360 aa14.48□□□□□ -0.09
NPC1-202ENST00000540608 NRBP1Q9UHY1 535 aa14.48□□□□□ -0.09
NPC1-202ENST00000540608 PFKFB2O60825 505 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 HMGB1P09429 215 aaKnown RBP14.47□□□□□ -0.09
NPC1-202ENST00000540608 SCRN1Q12765 414 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 CCDC129Q6ZRS4 1044 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 DDX11Q96FC9 970 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 CDC25BP30305 580 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 ADD1P35611 737 aaKnown RBP14.47□□□□□ -0.09
NPC1-202ENST00000540608 LRMPQ12912 555 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 IFNL2Q8IZJ0 200 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 ANKRD7Q92527 254 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 SEC62Q99442 399 aaKnown RBP14.47□□□□□ -0.09
NPC1-202ENST00000540608 PRDM4Q9UKN5 801 aa14.47□□□□□ -0.09
NPC1-202ENST00000540608 CYP27B1O15528 508 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 CSB-PGBD3P0DP91 1061 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 CHRNA2Q15822 529 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 NAA16Q6N069 864 aaPredicted RBP14.46□□□□□ -0.09
NPC1-202ENST00000540608 DNAJC2Q99543 621 aaKnown RBP14.46□□□□□ -0.09
NPC1-202ENST00000540608 DBNDD2Q9BQY9 259 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 RCOR1Q9UKL0 485 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 NDUFB9Q9Y6M9 179 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 CTAGE5O15320 804 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 PPP4R3BQ5MIZ7 849 aa14.46□□□□□ -0.09
NPC1-202ENST00000540608 COL18A1P39060 1754 aa14.46□□□□□ -0.1
NPC1-202ENST00000540608 CHGBP05060 677 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 DHX32Q7L7V1 743 aaKnown RBP14.45□□□□□ -0.1
NPC1-202ENST00000540608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.45□□□□□ -0.11e-7■■□□□ 11.5
NPC1-202ENST00000540608 CLIP2Q9UDT6 1046 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 SNRPA1P09661 255 aaKnown RBP14.45□□□□□ -0.1
NPC1-202ENST00000540608 HSPA2P54652 639 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 IQCB1Q15051 598 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 SARM1Q6SZW1 724 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 UBE3BQ7Z3V4 1068 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 PDCL2Q8N4E4 241 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 KBTBD3Q8NAB2 608 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 SH3TC1Q8TE82 1336 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 FGD1P98174 961 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 STOX1Q6ZVD7 989 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 TTC5Q8N0Z6 440 aa14.45□□□□□ -0.1
NPC1-202ENST00000540608 NSUN7Q8NE18 718 aaKnown RBP14.45□□□□□ -0.1
NPC1-202ENST00000540608 ATF3P18847 181 aa14.44□□□□□ -0.1
NPC1-202ENST00000540608 ATL3Q6DD88 541 aa14.44□□□□□ -0.1
NPC1-202ENST00000540608 DDX46Q7L014 1031 aaKnown RBP14.44□□□□□ -0.1
NPC1-202ENST00000540608 TICAM2Q86XR7 235 aa14.44□□□□□ -0.1
NPC1-202ENST00000540608 CCAR1Q8IX12 1150 aaKnown RBP14.44□□□□□ -0.1
NPC1-202ENST00000540608 CACTINQ8WUQ7 758 aaKnown RBP14.44□□□□□ -0.1
NPC1-202ENST00000540608 DCAF5Q96JK2 942 aa14.44□□□□□ -0.1
NPC1-202ENST00000540608 LRRC2Q9BYS8 371 aa14.44□□□□□ -0.1
NPC1-202ENST00000540608 GOLGA6L19H0YKK7 550 aa14.44□□□□□ -0.1
NPC1-202ENST00000540608 EXOSC10Q01780 885 aaKnown RBP14.44□□□□□ -0.1
NPC1-202ENST00000540608 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
NPC1-202ENST00000540608 A0A087WZG4 1122 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 SMTNL1A8MU46 457 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 ATP5J2-PTCD1G3V325 749 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 PTCD1O75127 700 aaKnown RBP14.43□□□□□ -0.1
NPC1-202ENST00000540608 CTDNEP1O95476 244 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 SYCP1Q15431 976 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 DSCC1Q9BVC3 393 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 AGXT2Q9BYV1 514 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 PAXBP1Q9Y5B6 917 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 CASP7P55210 303 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 CEBPZQ03701 1054 aaKnown RBP14.43□□□□□ -0.1
NPC1-202ENST00000540608 STX1AQ16623 288 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 CCDC144BQ3MJ40 725 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 CCDC144CPQ8IYA2 1237 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 MRFAP1L1Q96HT8 127 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 FMNL2Q96PY5 1086 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 TMEM94Q12767 1356 aa14.43□□□□□ -0.1
NPC1-202ENST00000540608 TNNT1P13805 278 aa14.42□□□□□ -0.1
NPC1-202ENST00000540608 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
NPC1-202ENST00000540608 ATP2B3Q16720 1220 aa14.42□□□□□ -0.1
NPC1-202ENST00000540608 C16orf45Q96MC5 204 aaPredicted RBP14.42□□□□□ -0.1
NPC1-202ENST00000540608 ZNF396Q96N95 335 aaPredicted RBP14.42□□□□□ -0.1
NPC1-202ENST00000540608 PALLDQ8WX93 1383 aa14.42□□□□□ -0.1
NPC1-202ENST00000540608 PTPDC1A2A3K4 754 aa14.42□□□□□ -0.1
NPC1-202ENST00000540608 C11orf57Q6ZUT1 292 aaPredicted RBP14.42□□□□□ -0.1
NPC1-202ENST00000540608 AFDNP55196 1824 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms