RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
CPT1A-206ENST00000540367 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
CPT1A-206ENST00000540367 KCND1Q9NSA2 647 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 LINS1Q8NG48 757 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 BECN2A8MW95 431 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
CPT1A-206ENST00000540367 SLFNL1Q499Z3 407 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
CPT1A-206ENST00000540367 SMARCC2Q8TAQ2 1214 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
CPT1A-206ENST00000540367 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
CPT1A-206ENST00000540367 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 Q6ZUG5 572 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.3
CPT1A-206ENST00000540367 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
CPT1A-206ENST00000540367 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 COL15A1P39059 1388 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 HSPA2P54652 639 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
CPT1A-206ENST00000540367 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 LLPHQ9BRT6 129 aaKnown RBP13.15□□□□□ -0.3
CPT1A-206ENST00000540367 SIL1Q9H173 461 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 ANO10Q9NW15 660 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 RFX7Q2KHR2 1363 aa13.15□□□□□ -0.3
CPT1A-206ENST00000540367 KIF2AO00139 706 aaPredicted RBP13.14□□□□□ -0.31
CPT1A-206ENST00000540367 CEBPZQ03701 1054 aaKnown RBP13.14□□□□□ -0.31
CPT1A-206ENST00000540367 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
CPT1A-206ENST00000540367 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
CPT1A-206ENST00000540367 FILIP1Q7Z7B0 1213 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 IP6K1Q92551 441 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
CPT1A-206ENST00000540367 CHGBP05060 677 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 ERBB3P21860 1342 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 GSDMDP57764 484 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 SCRN1Q12765 414 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 TERF2Q15554 542 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 FBXO38Q6PIJ6 1188 aa13.14□□□□□ -0.31
CPT1A-206ENST00000540367 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
CPT1A-206ENST00000540367 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 SLU7O95391 586 aaKnown RBP13.13□□□□□ -0.31
CPT1A-206ENST00000540367 ADRA2BP18089 450 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 FAM160A1Q05DH4 1040 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 ELF2Q15723 593 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 ENGASEQ8NFI3 743 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 CCDC9Q9Y3X0 531 aaKnown RBP13.13□□□□□ -0.31
CPT1A-206ENST00000540367 NFAT5O94916 1531 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 PFKFB2O60825 505 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
CPT1A-206ENST00000540367 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
CPT1A-206ENST00000540367 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.13□□□□□ -0.31
CPT1A-206ENST00000540367 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 V9GYY5 206 aaPredicted RBP13.13□□□□□ -0.31
CPT1A-206ENST00000540367 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
CPT1A-206ENST00000540367 ZNF609O15014 1411 aa13.12□□□□□ -0.31
CPT1A-206ENST00000540367 CYP21A2P08686 494 aa13.12□□□□□ -0.31
CPT1A-206ENST00000540367 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
CPT1A-206ENST00000540367 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.31
CPT1A-206ENST00000540367 OSBPL5Q9H0X9 879 aaPredicted RBP13.12□□□□□ -0.31
CPT1A-206ENST00000540367 RNMTO43148 476 aaKnown RBP13.12□□□□□ -0.31
CPT1A-206ENST00000540367 DDX58O95786 925 aaKnown RBP13.12□□□□□ -0.31
CPT1A-206ENST00000540367 ATP5JP18859 108 aa13.12□□□□□ -0.31
CPT1A-206ENST00000540367 SLC39A6Q13433 755 aa13.12□□□□□ -0.31
CPT1A-206ENST00000540367 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
CPT1A-206ENST00000540367 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
CPT1A-206ENST00000540367 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
CPT1A-206ENST00000540367 IMPACTQ9P2X3 320 aa13.12□□□□□ -0.31
CPT1A-206ENST00000540367 ABCC6O95255 1503 aa13.11□□□□□ -0.31
CPT1A-206ENST00000540367 TULP1O00294 542 aaPredicted RBP13.11□□□□□ -0.31
CPT1A-206ENST00000540367 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
CPT1A-206ENST00000540367 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
CPT1A-206ENST00000540367 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
CPT1A-206ENST00000540367 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
CPT1A-206ENST00000540367 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
CPT1A-206ENST00000540367 PXDNQ92626 1479 aa13.11□□□□□ -0.31
CPT1A-206ENST00000540367 SIPA1L3O60292 1781 aaPredicted RBP13.11□□□□□ -0.31
CPT1A-206ENST00000540367 PTPDC1A2A3K4 754 aa13.11□□□□□ -0.31
CPT1A-206ENST00000540367 ZC3H6P61129 1189 aaKnown RBP13.11□□□□□ -0.31
CPT1A-206ENST00000540367 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
CPT1A-206ENST00000540367 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
CPT1A-206ENST00000540367 L2HGDHQ9H9P8 463 aa13.11□□□□□ -0.31
CPT1A-206ENST00000540367 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
CPT1A-206ENST00000540367 A0A087WWV3 80 aa13.1□□□□□ -0.31
CPT1A-206ENST00000540367 CTDNEP1O95476 244 aa13.1□□□□□ -0.31
CPT1A-206ENST00000540367 HMGB1P09429 215 aaKnown RBP13.1□□□□□ -0.31
CPT1A-206ENST00000540367 MYL6BP14649 208 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms