RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DNAJC25Q9H1X3 360 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 PRDM11Q9NQV5 511 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 TYRO3Q06418 890 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 NOLC1Q14978 699 aaKnown RBP eCLIP16.16■□□□□ 0.18
BNIP3-202ENST00000540159 PGBD1Q96JS3 809 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 FUCA2Q9BTY2 467 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 NRBP1Q9UHY1 535 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 N4BP2Q86UW6 1770 aaPredicted RBP16.16■□□□□ 0.18
BNIP3-202ENST00000540159 NCAPD2Q15021 1401 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 WASHC4Q2M389 1173 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 KCNB2Q92953 911 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 TMEM94Q12767 1356 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 PTGS1P23219 599 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 LRMPQ12912 555 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 CSPP1Q1MSJ5 1256 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 PAG1Q9NWQ8 432 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 C5P01031 1676 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 GPTP24298 496 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 ADORA1P30542 326 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 GTF3C6Q969F1 213 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
BNIP3-202ENST00000540159 PDCP20941 246 aa16.14■□□□□ 0.17
BNIP3-202ENST00000540159 ANKRD1Q15327 319 aa16.14■□□□□ 0.17
BNIP3-202ENST00000540159 IFIT1P09914 478 aaKnown RBP16.14■□□□□ 0.17
BNIP3-202ENST00000540159 KCNF1Q9H3M0 494 aa16.14■□□□□ 0.17
BNIP3-202ENST00000540159 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
BNIP3-202ENST00000540159 FOXO4P98177 505 aa16.13■□□□□ 0.17
BNIP3-202ENST00000540159 ATG9AQ7Z3C6 839 aa16.13■□□□□ 0.17
BNIP3-202ENST00000540159 PLBD2Q8NHP8 589 aa16.13■□□□□ 0.17
BNIP3-202ENST00000540159 HAUS7Q99871 368 aa16.13■□□□□ 0.17
BNIP3-202ENST00000540159 KBTBD3Q8NAB2 608 aa16.13■□□□□ 0.17
BNIP3-202ENST00000540159 TRIM5Q9C035 493 aa16.13■□□□□ 0.17
BNIP3-202ENST00000540159 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
BNIP3-202ENST00000540159 LETM1O95202 739 aaPredicted RBP16.12■□□□□ 0.17
BNIP3-202ENST00000540159 STK11IPQ8N1F8 1099 aa16.12■□□□□ 0.17
BNIP3-202ENST00000540159 CBX8Q9HC52 389 aa16.12■□□□□ 0.17
BNIP3-202ENST00000540159 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
BNIP3-202ENST00000540159 M0R2C6 588 aa16.11■□□□□ 0.17
BNIP3-202ENST00000540159 RXRAP19793 462 aa16.11■□□□□ 0.17
BNIP3-202ENST00000540159 SCARF1Q14162 830 aa16.11■□□□□ 0.17
BNIP3-202ENST00000540159 TAF7LQ5H9L4 462 aa16.11■□□□□ 0.17
BNIP3-202ENST00000540159 HMG20BQ9P0W2 317 aa16.11■□□□□ 0.17
BNIP3-202ENST00000540159 DENND2AQ9ULE3 1009 aa16.11■□□□□ 0.17
BNIP3-202ENST00000540159 POLR3DP05423 398 aaPredicted RBP16.11■□□□□ 0.17
BNIP3-202ENST00000540159 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
BNIP3-202ENST00000540159 HSPD1P10809 573 aaKnown RBP16.1■□□□□ 0.17
BNIP3-202ENST00000540159 CASP7P55210 303 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 UVSSAQ2YD98 709 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 CCDC186Q7Z3E2 898 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
BNIP3-202ENST00000540159 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 FAM200AQ8TCP9 573 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 PIBF1Q8WXW3 757 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
BNIP3-202ENST00000540159 SCAND2PQ9GZW5 306 aaPredicted RBP16.1■□□□□ 0.17
BNIP3-202ENST00000540159 GOLGB1Q14789 3259 aaKnown RBP16.1■□□□□ 0.17
BNIP3-202ENST00000540159 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 ZCRB1Q8TBF4 217 aaKnown RBP16.1■□□□□ 0.17
BNIP3-202ENST00000540159 OSBP2Q969R2 916 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 MAST3O60307 1309 aa16.1■□□□□ 0.17
BNIP3-202ENST00000540159 E7EWF7 191 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 ZNF165P49910 485 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 SLIT3O75094 1523 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 MCM5P33992 734 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 ME1P48163 572 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 RESTQ13127 1097 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 KRT32Q14532 448 aa16.09■□□□□ 0.17
BNIP3-202ENST00000540159 ARID5BQ14865 1188 aa16.08■□□□□ 0.17
BNIP3-202ENST00000540159 ISM2Q6H9L7 571 aa16.08■□□□□ 0.17
BNIP3-202ENST00000540159 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.17
BNIP3-202ENST00000540159 NSUN7Q8NE18 718 aaKnown RBP16.08■□□□□ 0.17
BNIP3-202ENST00000540159 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.17
BNIP3-202ENST00000540159 SNAP23O00161 211 aa16.08■□□□□ 0.16
BNIP3-202ENST00000540159 USPL1Q5W0Q7 1092 aa16.08■□□□□ 0.16
BNIP3-202ENST00000540159 C16orf45Q96MC5 204 aaPredicted RBP16.08■□□□□ 0.16
BNIP3-202ENST00000540159 CCDC57Q2TAC2 916 aa16.08■□□□□ 0.16
BNIP3-202ENST00000540159 DHX32Q7L7V1 743 aaKnown RBP16.08■□□□□ 0.16
BNIP3-202ENST00000540159 GOLPH3LQ9H4A5 285 aa16.08■□□□□ 0.16
BNIP3-202ENST00000540159 TTC39AQ5SRH9 613 aa16.07■□□□□ 0.16
BNIP3-202ENST00000540159 C11orf57Q6ZUT1 292 aaPredicted RBP16.07■□□□□ 0.16
BNIP3-202ENST00000540159 USP54Q70EL1 1684 aa16.07■□□□□ 0.16
BNIP3-202ENST00000540159 CCAR1Q8IX12 1150 aaKnown RBP16.07■□□□□ 0.16
BNIP3-202ENST00000540159 CEP126Q9P2H0 1117 aa16.07■□□□□ 0.16
BNIP3-202ENST00000540159 H7C1W4 665 aa16.07■□□□□ 0.16
BNIP3-202ENST00000540159 EYA2O00167 538 aa16.07■□□□□ 0.16
BNIP3-202ENST00000540159 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
BNIP3-202ENST00000540159 PRDM10Q9NQV6 1147 aa16.07■□□□□ 0.16
BNIP3-202ENST00000540159 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
BNIP3-202ENST00000540159 ZAP70P43403 619 aa16.06■□□□□ 0.16
BNIP3-202ENST00000540159 EVA1CP58658 441 aa16.06■□□□□ 0.16
BNIP3-202ENST00000540159 AFDNP55196 1824 aaKnown RBP16.06■□□□□ 0.16
BNIP3-202ENST00000540159 GLIPR1L2Q4G1C9 344 aa16.06■□□□□ 0.16
BNIP3-202ENST00000540159 A0A1B0GVL5 298 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 BIN1O00499 593 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 APPP05067 770 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms