RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 FTSJ3Q8IY81 847 aaKnown RBP9.39□□□□□ -0.91
CCDC60-204ENST00000539847 ARHGAP45Q92619 1136 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
CCDC60-204ENST00000539847 GCC1Q96CN9 775 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 PANK2Q9BZ23 570 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 C4AP0C0L4 1744 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
CCDC60-204ENST00000539847 PRSS12P56730 875 aa9.38□□□□□ -0.91
CCDC60-204ENST00000539847 DOK7Q18PE1 504 aa9.38□□□□□ -0.91
CCDC60-204ENST00000539847 DALRD3Q5D0E6 543 aaKnown RBP9.38□□□□□ -0.91
CCDC60-204ENST00000539847 C9orf131Q5VYM1 1079 aa9.38□□□□□ -0.91
CCDC60-204ENST00000539847 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
CCDC60-204ENST00000539847 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
CCDC60-204ENST00000539847 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
CCDC60-204ENST00000539847 NMRK2Q9NPI5 230 aa9.38□□□□□ -0.91
CCDC60-204ENST00000539847 USP42Q9H9J4 1324 aaKnown RBP9.37□□□□□ -0.91
CCDC60-204ENST00000539847 ZNF500O60304 480 aaPredicted RBP9.37□□□□□ -0.91
CCDC60-204ENST00000539847 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
CCDC60-204ENST00000539847 CABP4P57796 275 aa9.37□□□□□ -0.91
CCDC60-204ENST00000539847 NUCB2P80303 420 aa9.37□□□□□ -0.91
CCDC60-204ENST00000539847 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
CCDC60-204ENST00000539847 CWC22Q9HCG8 908 aaKnown RBP9.37□□□□□ -0.91
CCDC60-204ENST00000539847 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
CCDC60-204ENST00000539847 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
CCDC60-204ENST00000539847 WWC3Q9ULE0 1092 aa9.37□□□□□ -0.91
CCDC60-204ENST00000539847 KDM6AO15550 1401 aaPredicted RBP9.37□□□□□ -0.91
CCDC60-204ENST00000539847 COL5A3P25940 1745 aaPredicted RBP9.36□□□□□ -0.91
CCDC60-204ENST00000539847 BRCA1P38398 1863 aaKnown RBP9.36□□□□□ -0.91
CCDC60-204ENST00000539847 ARFGEF1Q9Y6D6 1849 aa9.36□□□□□ -0.91
CCDC60-204ENST00000539847 K7ELQ4 463 aaPredicted RBP9.36□□□□□ -0.91
CCDC60-204ENST00000539847 CRKLP46109 303 aaKnown RBP9.36□□□□□ -0.91
CCDC60-204ENST00000539847 MTHFSP49914 203 aa9.36□□□□□ -0.91
CCDC60-204ENST00000539847 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
CCDC60-204ENST00000539847 C1orf141Q5JVX7 400 aa9.36□□□□□ -0.91
CCDC60-204ENST00000539847 ZNF530Q6P9A1 599 aaPredicted RBP9.36□□□□□ -0.91
CCDC60-204ENST00000539847 CHD1LQ86WJ1 897 aa9.36□□□□□ -0.91
CCDC60-204ENST00000539847 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC60-204ENST00000539847 GZF1Q9H116 711 aaPredicted RBP9.36□□□□□ -0.91
CCDC60-204ENST00000539847 TRIM27P14373 513 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 COL9A1P20849 921 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 TM4SF1P30408 202 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 GAS2L3Q86XJ1 694 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 SMC1BQ8NDV3 1235 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
CCDC60-204ENST00000539847 LHX6Q9UPM6 363 aa9.35□□□□□ -0.91
CCDC60-204ENST00000539847 POLRMTO00411 1230 aaKnown RBP9.34□□□□□ -0.91
CCDC60-204ENST00000539847 NASPP49321 788 aaPredicted RBP9.34□□□□□ -0.91
CCDC60-204ENST00000539847 DDR1Q08345 913 aa9.34□□□□□ -0.91
CCDC60-204ENST00000539847 RABEP1Q15276 862 aa9.34□□□□□ -0.91
CCDC60-204ENST00000539847 AEBP1Q8IUX7 1158 aa9.34□□□□□ -0.91
CCDC60-204ENST00000539847 PDLIM2Q96JY6 352 aa9.34□□□□□ -0.91
CCDC60-204ENST00000539847 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.91
CCDC60-204ENST00000539847 KIF2CQ99661 725 aa9.34□□□□□ -0.91
CCDC60-204ENST00000539847 SMC4Q9NTJ3 1288 aa9.34□□□□□ -0.91
CCDC60-204ENST00000539847 NOL7Q9UMY1 257 aaKnown RBP9.34□□□□□ -0.91
CCDC60-204ENST00000539847 N4BP2Q86UW6 1770 aaPredicted RBP9.34□□□□□ -0.91
CCDC60-204ENST00000539847 MYH14Q7Z406 1995 aaKnown RBP9.33□□□□□ -0.92
CCDC60-204ENST00000539847 PTCD1O75127 700 aaKnown RBP9.33□□□□□ -0.92
CCDC60-204ENST00000539847 ZPR1O75312 459 aa9.33□□□□□ -0.92
CCDC60-204ENST00000539847 LMNB1P20700 586 aa9.33□□□□□ -0.92
CCDC60-204ENST00000539847 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
CCDC60-204ENST00000539847 INTS5Q6P9B9 1019 aaKnown RBP9.33□□□□□ -0.92
CCDC60-204ENST00000539847 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
CCDC60-204ENST00000539847 SSH1Q8WYL5 1049 aa9.33□□□□□ -0.92
CCDC60-204ENST00000539847 RNF181Q9P0P0 153 aa9.33□□□□□ -0.92
CCDC60-204ENST00000539847 WDR90Q96KV7 1748 aa9.33□□□□□ -0.92
CCDC60-204ENST00000539847 SOS1Q07889 1333 aaPredicted RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 ERBB4Q15303 1308 aa9.32□□□□□ -0.92
CCDC60-204ENST00000539847 C3orf80F5H4A9 247 aa9.32□□□□□ -0.92
CCDC60-204ENST00000539847 RIMBP2O15034 1052 aa9.32□□□□□ -0.92
CCDC60-204ENST00000539847 BAG4O95429 457 aaKnown RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 CYP2E1P05181 493 aaPredicted RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 VEGFAP15692 232 aaPredicted RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 MSNP26038 577 aaKnown RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
CCDC60-204ENST00000539847 KIAA1211Q6ZU35 1233 aa9.32□□□□□ -0.92
CCDC60-204ENST00000539847 RETREG2Q8NC44 543 aa9.32□□□□□ -0.92
CCDC60-204ENST00000539847 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
CCDC60-204ENST00000539847 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
CCDC60-204ENST00000539847 KCPQ6ZWJ8 1503 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 GLTPD2A6NH11 291 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 DYNC1I1O14576 645 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
CCDC60-204ENST00000539847 CLK2P49760 499 aaKnown RBP9.31□□□□□ -0.92
CCDC60-204ENST00000539847 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC60-204ENST00000539847 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 SRP68Q9UHB9 627 aaKnown RBP9.31□□□□□ -0.92
CCDC60-204ENST00000539847 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 NOB1Q9ULX3 412 aaKnown RBP9.31□□□□□ -0.92
CCDC60-204ENST00000539847 TNNQ9UQP3 1299 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 MRC1P22897 1456 aa9.31□□□□□ -0.92
CCDC60-204ENST00000539847 RCCD1A6NED2 376 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 ZBTB7BO15156 539 aaPredicted RBP9.3□□□□□ -0.92
CCDC60-204ENST00000539847 CDC45O75419 566 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 CYP19A1P11511 503 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms