RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 BCAMP50895 628 aa12.29□□□□□ -0.44
GTF2H3-207ENST00000539429 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
GTF2H3-207ENST00000539429 USP46P62068 366 aa12.29□□□□□ -0.44
GTF2H3-207ENST00000539429 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
GTF2H3-207ENST00000539429 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
GTF2H3-207ENST00000539429 MYL6BP14649 208 aa12.28□□□□□ -0.44
GTF2H3-207ENST00000539429 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
GTF2H3-207ENST00000539429 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
GTF2H3-207ENST00000539429 DZIP3Q86Y13 1208 aaKnown RBP12.28□□□□□ -0.44
GTF2H3-207ENST00000539429 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
GTF2H3-207ENST00000539429 SCN7AQ01118 1682 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 PPP4CP60510 307 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 GNAI1P63096 354 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 HPS5Q9UPZ3 1129 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 ZNF652Q9Y2D9 606 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 BCORQ6W2J9 1755 aa12.27□□□□□ -0.45
GTF2H3-207ENST00000539429 SPTLC1O15269 473 aa12.26□□□□□ -0.45
GTF2H3-207ENST00000539429 KIF6Q6ZMV9 814 aa12.26□□□□□ -0.45
GTF2H3-207ENST00000539429 TSR3Q9UJK0 312 aaKnown RBP12.26□□□□□ -0.45
GTF2H3-207ENST00000539429 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
GTF2H3-207ENST00000539429 CHD4Q14839 1912 aa12.26□□□□□ -0.45
GTF2H3-207ENST00000539429 NUP98P52948 1817 aa12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 CHL1O00533 1208 aa12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 HOXA2O43364 376 aa12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 GJA5P36382 358 aa12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 RSBN1LQ6PCB5 846 aaPredicted RBP12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 SETDB2Q96T68 719 aa12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 IFT57Q9NWB7 429 aa12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 KIF13BQ9NQT8 1826 aa12.25□□□□□ -0.45
GTF2H3-207ENST00000539429 SERPINB2P05120 415 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 NDUFV2P19404 249 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 FUT2Q10981 343 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 NFIXQ14938 502 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 TUSC1Q2TAM9 212 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 NBPF10Q6P3W6 841 aaKnown RBP12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 NBPF15Q8N660 670 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 PRR14Q9BWN1 585 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 MBIPQ9NS73 344 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 LIMD1Q9UGP4 676 aa12.24□□□□□ -0.45
GTF2H3-207ENST00000539429 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 TM4SF1P30408 202 aa12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 DDR1Q08345 913 aa12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 GRIPAP1Q4V328 841 aa12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 TBC1D9BQ66K14 1250 aa12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 THSD4Q6ZMP0 1018 aa12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 PCDH10Q9P2E7 1040 aa12.23□□□□□ -0.45
GTF2H3-207ENST00000539429 CARMIL3Q8ND23 1372 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 ERBB4Q15303 1308 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 ACTN4O43707 911 aaKnown RBP12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 GTF2E1P29083 439 aaPredicted RBP12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 TGFB2P61812 414 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 CCDC27Q2M243 656 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 KRT24Q2M2I5 525 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
GTF2H3-207ENST00000539429 C10orf71Q711Q0 1435 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 GRIN3BO60391 1043 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 ANXA1P04083 346 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 ST5P78524 1137 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 CHMP4AQ9BY43 222 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 NIP7Q9Y221 180 aaKnown RBP eCLIP12.21□□□□□ -0.45
GTF2H3-207ENST00000539429 CACNA1SQ13698 1873 aa12.21□□□□□ -0.46
GTF2H3-207ENST00000539429 CCER2I3L3R5 266 aa12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 FDX1P10109 184 aa12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 NBPF5PQ86XG9 351 aaPredicted RBP12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 BCS1LQ9Y276 419 aa12.2□□□□□ -0.46
GTF2H3-207ENST00000539429 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 HOXB7P09629 217 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 ZNF853P0CG23 659 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 DPEP1P16444 411 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 CCDC24Q8N4L8 307 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 DDX21Q9NR30 783 aaKnown RBP eCLIP12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 CHPF2Q9P2E5 772 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 DBF4Q9UBU7 674 aaPredicted RBP12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 NRXN2Q9P2S2 1712 aa12.19□□□□□ -0.46
GTF2H3-207ENST00000539429 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
GTF2H3-207ENST00000539429 IL16Q14005 1332 aa12.18□□□□□ -0.46
GTF2H3-207ENST00000539429 KIAA1551Q9HCM1 1747 aa12.18□□□□□ -0.46
GTF2H3-207ENST00000539429 ERVV-1B6SEH8 477 aa12.18□□□□□ -0.46
GTF2H3-207ENST00000539429 H0YIN7 160 aa12.18□□□□□ -0.46
GTF2H3-207ENST00000539429 GPTP24298 496 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms