RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LMBR1LQ6UX01 489 aa16.73■□□□□ 0.27
CACNB1-206ENST00000539338 DACT1Q9NYF0 836 aa16.73■□□□□ 0.27
CACNB1-206ENST00000539338 GJA3Q9Y6H8 435 aa16.73■□□□□ 0.27
CACNB1-206ENST00000539338 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
CACNB1-206ENST00000539338 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
CACNB1-206ENST00000539338 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
CACNB1-206ENST00000539338 JAKMIP3Q5VZ66 844 aa16.73■□□□□ 0.27
CACNB1-206ENST00000539338 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
CACNB1-206ENST00000539338 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
CACNB1-206ENST00000539338 PRKCSHP14314 528 aaPredicted RBP16.72■□□□□ 0.27
CACNB1-206ENST00000539338 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 TSG101Q99816 390 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 ALDH1L1O75891 902 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 YEATS4O95619 227 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 CLCN1P35523 988 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 AK2P54819 239 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 SEPT7Q16181 437 aaKnown RBP16.72■□□□□ 0.27
CACNB1-206ENST00000539338 CWF19L2Q2TBE0 894 aaKnown RBP16.72■□□□□ 0.27
CACNB1-206ENST00000539338 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 HSP90AA4PQ58FG1 418 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
CACNB1-206ENST00000539338 FEZ1Q99689 392 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 CEP135Q66GS9 1140 aa16.72■□□□□ 0.27
CACNB1-206ENST00000539338 CCDC186Q7Z3E2 898 aa16.71■□□□□ 0.27
CACNB1-206ENST00000539338 GCC2Q8IWJ2 1684 aa16.71■□□□□ 0.27
CACNB1-206ENST00000539338 SYKP43405 635 aa16.71■□□□□ 0.27
CACNB1-206ENST00000539338 TDRD12Q587J7 1177 aaKnown RBP16.71■□□□□ 0.27
CACNB1-206ENST00000539338 VAT1LQ9HCJ6 419 aa16.71■□□□□ 0.27
CACNB1-206ENST00000539338 TSPY2A6NKD2 308 aa16.71■□□□□ 0.26
CACNB1-206ENST00000539338 PPP1R12BO60237 982 aaPredicted RBP16.71■□□□□ 0.26
CACNB1-206ENST00000539338 MATR3P43243 847 aaKnown RBP eCLIP16.71■□□□□ 0.26
CACNB1-206ENST00000539338 SSR1P43307 286 aaKnown RBP16.71■□□□□ 0.26
CACNB1-206ENST00000539338 DNAJC25Q9H1X3 360 aa16.71■□□□□ 0.26
CACNB1-206ENST00000539338 CAVIN2O95810 425 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
CACNB1-206ENST00000539338 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 FAM200AQ8TCP9 573 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 CABP5Q9NP86 173 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 PBRM1Q86U86 1689 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 ANKRD62A6NC57 917 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 TTC12Q9H892 705 aaPredicted RBP16.7■□□□□ 0.26
CACNB1-206ENST00000539338 PZPP20742 1482 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNB1-206ENST00000539338 ALG1Q9BT22 464 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 RAB34Q9BZG1 259 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 ZNF408Q9H9D4 720 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 ZBTB7BO15156 539 aaPredicted RBP16.7■□□□□ 0.26
CACNB1-206ENST00000539338 EAPPQ56P03 285 aaPredicted RBP16.7■□□□□ 0.26
CACNB1-206ENST00000539338 USP26Q9BXU7 913 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
CACNB1-206ENST00000539338 ZSWIM4Q9H7M6 989 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 WWC3Q9ULE0 1092 aa16.7■□□□□ 0.26
CACNB1-206ENST00000539338 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
CACNB1-206ENST00000539338 IDEP14735 1019 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
CACNB1-206ENST00000539338 TMEM2Q9UHN6 1383 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
CACNB1-206ENST00000539338 OTUD7AQ8TE49 926 aaPredicted RBP16.69■□□□□ 0.26
CACNB1-206ENST00000539338 ZBTB43O43298 467 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 GCP02774 474 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 CHMLP26374 656 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 MARCKSP29966 332 aaPredicted RBP16.69■□□□□ 0.26
CACNB1-206ENST00000539338 CCDC152Q4G0S7 254 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 CHST3Q7LGC8 479 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 JCADQ9P266 1359 aa16.69■□□□□ 0.26
CACNB1-206ENST00000539338 ATP2B3Q16720 1220 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 DYNC1I1O14576 645 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 GNG11P61952 73 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 WTAPQ15007 396 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 EYA1Q99502 592 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 NPATQ14207 1427 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 OTUD7BQ6GQQ9 843 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 CCDC150Q8NCX0 1101 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 MRPS27Q92552 414 aaKnown RBP16.68■□□□□ 0.26
CACNB1-206ENST00000539338 AFF2P51816 1311 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 UBA7P41226 1012 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 KAT14Q9H8E8 782 aa16.68■□□□□ 0.26
CACNB1-206ENST00000539338 USO1O60763 962 aaKnown RBP16.67■□□□□ 0.26
CACNB1-206ENST00000539338 SKILP12757 684 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
CACNB1-206ENST00000539338 UBASH3AP57075 661 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 MAP9Q49MG5 647 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 G2E3Q7L622 706 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.67■□□□□ 0.26
CACNB1-206ENST00000539338 TCP11L1Q9NUJ3 509 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 AFMP43652 599 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 FLT4P35916 1363 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 ABCC1P33527 1531 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 KIF5BP33176 963 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
CACNB1-206ENST00000539338 CCDC178Q5BJE1 867 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 CNBD1Q8NA66 436 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms