RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 PIBF1Q8WXW3 757 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 PGBD1Q96JS3 809 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.17□□□□□ -0.14
CPNE8-203ENST00000538596 NR1I2O75469 434 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 TYRO3Q06418 890 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 SCRN1Q12765 414 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 SASS6Q6UVJ0 657 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 ATG9AQ7Z3C6 839 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 KCNF1Q9H3M0 494 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 ELP1O95163 1332 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 A1BGP04217 495 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 KRT32Q14532 448 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 LRRC24Q50LG9 513 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 TSC1Q92574 1164 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 TNMDQ9H2S6 317 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.16□□□□□ -0.14
CPNE8-203ENST00000538596 FGD1P98174 961 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 CHST3Q7LGC8 479 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 ARID3AQ99856 593 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 SCAND2PQ9GZW5 306 aaPredicted RBP14.16□□□□□ -0.14
CPNE8-203ENST00000538596 ZBTB3Q9H5J0 574 aa14.16□□□□□ -0.14
CPNE8-203ENST00000538596 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
CPNE8-203ENST00000538596 ZNF335Q9H4Z2 1342 aaPredicted RBP14.16□□□□□ -0.14
CPNE8-203ENST00000538596 COL18A1P39060 1754 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 KBTBD3Q8NAB2 608 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 FTOQ9C0B1 505 aaKnown RBP eCLIP14.15□□□□□ -0.14
CPNE8-203ENST00000538596 PYCARDQ9ULZ3 195 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 KIF1AQ12756 1690 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 STRCQ7RTU9 1775 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 RESTQ13127 1097 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 ANO6Q4KMQ2 910 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 PDCL3Q9H2J4 239 aa14.15□□□□□ -0.14
CPNE8-203ENST00000538596 H3BQV1 296 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 CCT2P78371 535 aaKnown RBP14.14□□□□□ -0.15
CPNE8-203ENST00000538596 APOBRQ0VD83 1088 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 FAM200AQ8TCP9 573 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 BICD2Q8TD16 824 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 PAG1Q9NWQ8 432 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 MST1RQ04912 1400 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 H7C1W4 665 aa14.14□□□□□ -0.15
CPNE8-203ENST00000538596 PUS3Q9BZE2 481 aaKnown RBP14.14□□□□□ -0.15
CPNE8-203ENST00000538596 NCOA5Q9HCD5 579 aaKnown RBP14.14□□□□□ -0.15
CPNE8-203ENST00000538596 NAP1L2Q9ULW6 460 aaPredicted RBP14.14□□□□□ -0.15
CPNE8-203ENST00000538596 CBX8Q9HC52 389 aa14.13□□□□□ -0.15
CPNE8-203ENST00000538596 FAM177BA6PVY3 158 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 CTDNEP1O95476 244 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 CCDC85AQ96PX6 553 aaPredicted RBP14.12□□□□□ -0.15
CPNE8-203ENST00000538596 GLI3P10071 1580 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 CWC25Q9NXE8 425 aaPredicted RBP14.12□□□□□ -0.15
CPNE8-203ENST00000538596 SH3TC1Q8TE82 1336 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 GUCY1B3Q02153 619 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 NSUN7Q8NE18 718 aaKnown RBP14.12□□□□□ -0.15
CPNE8-203ENST00000538596 CLSTN2Q9H4D0 955 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
CPNE8-203ENST00000538596 LAMA4Q16363 1823 aa14.12□□□□□ -0.15
CPNE8-203ENST00000538596 HSPD1P10809 573 aaKnown RBP14.11□□□□□ -0.15
CPNE8-203ENST00000538596 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
CPNE8-203ENST00000538596 PTGS1P23219 599 aa14.11□□□□□ -0.15
CPNE8-203ENST00000538596 DHX32Q7L7V1 743 aaKnown RBP14.11□□□□□ -0.15
CPNE8-203ENST00000538596 DNAJC25Q9H1X3 360 aa14.11□□□□□ -0.15
CPNE8-203ENST00000538596 A0A087WWV3 80 aa14.11□□□□□ -0.15
CPNE8-203ENST00000538596 DYNC1I1O14576 645 aa14.11□□□□□ -0.15
CPNE8-203ENST00000538596 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
CPNE8-203ENST00000538596 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
CPNE8-203ENST00000538596 NRBP1Q9UHY1 535 aa14.11□□□□□ -0.15
CPNE8-203ENST00000538596 XIRP1Q702N8 1843 aaKnown RBP14.1□□□□□ -0.15
CPNE8-203ENST00000538596 A0A1B0GUL7 405 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 E7EWF7 191 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 PFKFB2O60825 505 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 IFIT1P09914 478 aaKnown RBP14.1□□□□□ -0.15
CPNE8-203ENST00000538596 ADD1P35611 737 aaKnown RBP14.1□□□□□ -0.15
CPNE8-203ENST00000538596 SMARCC2Q8TAQ2 1214 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 KIAA1524Q8TCG1 905 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 DDX19AQ9NUU7 478 aaKnown RBP14.1□□□□□ -0.15
CPNE8-203ENST00000538596 SPTLC3Q9NUV7 552 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 RFX7Q2KHR2 1363 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 MAST3O60307 1309 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 M0R2C6 588 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 FKBP4Q02790 459 aaKnown RBP eCLIP14.1□□□□□ -0.15
CPNE8-203ENST00000538596 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 ZMYM1Q5SVZ6 1142 aa14.1□□□□□ -0.15
CPNE8-203ENST00000538596 MYRIPQ8NFW9 859 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 EYA2O00167 538 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 IL15P40933 162 aaPredicted RBP14.09□□□□□ -0.15
CPNE8-203ENST00000538596 EXOSC10Q01780 885 aaKnown RBP14.09□□□□□ -0.15
CPNE8-203ENST00000538596 LRMPQ12912 555 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 GLIPR1L2Q4G1C9 344 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 RBM43Q6ZSC3 357 aaKnown RBP14.09□□□□□ -0.15
CPNE8-203ENST00000538596 TOM1L2Q6ZVM7 507 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 HELLSQ9NRZ9 838 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 PKD1L3Q7Z443 1732 aa14.09□□□□□ -0.15
CPNE8-203ENST00000538596 ADORA1P30542 326 aa14.08□□□□□ -0.15
CPNE8-203ENST00000538596 HAND2P61296 217 aa14.08□□□□□ -0.15
CPNE8-203ENST00000538596 OSBP2Q969R2 916 aa14.08□□□□□ -0.15
CPNE8-203ENST00000538596 ZNF165P49910 485 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms