RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 STARD3NLO95772 234 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 IL15P40933 162 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-208ENST00000538070 PIP4K2BP78356 416 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 KRT85P78386 507 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 LRP10Q7Z4F1 713 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 RXRAP19793 462 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 CLCN1P35523 988 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 TOB2Q14106 344 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-208ENST00000538070 SMIM5Q71RC9 77 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 CCDC144CPQ8IYA2 1237 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 KBTBD3Q8NAB2 608 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 XAGE2Q96GT9 111 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 FTOQ9C0B1 505 aaKnown RBP eCLIP10.31□□□□□ -0.76
UBE3B-208ENST00000538070 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
UBE3B-208ENST00000538070 H7C1W4 665 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 SOCS7O14512 581 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 ZAP70P43403 619 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 SCARF1Q14162 830 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 CCDC183Q5T5S1 534 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 BICDL1Q6ZP65 573 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 ZSCAN30Q86W11 494 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 DRC7Q8IY82 874 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 C17orf53Q8N3J3 647 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-208ENST00000538070 CHMP4CQ96CF2 233 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 HAUS7Q99871 368 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-208ENST00000538070 UTYO14607 1347 aa10.31□□□□□ -0.76
UBE3B-208ENST00000538070 A0A087WWV3 80 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 UBE2HP62256 183 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 ANKRD1Q15327 319 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 U3KPZ7 1027 aaPredicted RBP10.3□□□□□ -0.76
UBE3B-208ENST00000538070 LRRC37A3O60309 1634 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 LIG1P18858 919 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 TTC6Q86TZ1 520 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 CCDC191Q8NCU4 936 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 ERCC4Q92889 916 aaPredicted RBP10.3□□□□□ -0.76
UBE3B-208ENST00000538070 GREM2Q9H772 168 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 ZBTB1Q9Y2K1 713 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 ERVV-2B6SEH9 535 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 EXOC5O00471 708 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 STOX1Q6ZVD7 989 aa10.3□□□□□ -0.76
UBE3B-208ENST00000538070 TCIRG1Q13488 830 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 DACT1Q9NYF0 836 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 ZNF609O15014 1411 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 M0R2C6 588 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 PDCP20941 246 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 ITGA6P23229 1130 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
UBE3B-208ENST00000538070 TM6SF1Q9BZW5 370 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
UBE3B-208ENST00000538070 COL15A1P39059 1388 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 OSBP2Q969R2 916 aa10.29□□□□□ -0.76
UBE3B-208ENST00000538070 IRS4O14654 1257 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-208ENST00000538070 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
UBE3B-208ENST00000538070 POLR3DP05423 398 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-208ENST00000538070 HSPD1P10809 573 aaKnown RBP10.28□□□□□ -0.76
UBE3B-208ENST00000538070 CASP7P55210 303 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 KRT32Q14532 448 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 ATP2B3Q16720 1220 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 RABL6Q3YEC7 729 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-208ENST00000538070 CCDC24Q8N4L8 307 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 GJB4Q9NTQ9 266 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 TCHHQ07283 1943 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 CACNA1FO60840 1977 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 ADCY5O95622 1261 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 RBM10P98175 930 aaKnown RBP10.28□□□□□ -0.76
UBE3B-208ENST00000538070 RALYLQ86SE5 291 aaKnown RBP10.28□□□□□ -0.76
UBE3B-208ENST00000538070 ATG3Q9NT62 314 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 CPLX1O14810 134 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 SCRN1Q12765 414 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 TNMDQ9H2S6 317 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 HMG20BQ9P0W2 317 aa10.28□□□□□ -0.76
UBE3B-208ENST00000538070 E7EWF7 191 aa10.27□□□□□ -0.76
UBE3B-208ENST00000538070 SLC9C2Q5TAH2 1124 aa10.27□□□□□ -0.76
UBE3B-208ENST00000538070 DZIP3Q86Y13 1208 aaKnown RBP10.27□□□□□ -0.76
UBE3B-208ENST00000538070 NUP62CLQ9H1M0 184 aa10.27□□□□□ -0.76
UBE3B-208ENST00000538070 INCENPQ9NQS7 918 aa10.27□□□□□ -0.76
UBE3B-208ENST00000538070 MAST3O60307 1309 aa10.27□□□□□ -0.76
UBE3B-208ENST00000538070 SLIT3O75094 1523 aa10.27□□□□□ -0.77
UBE3B-208ENST00000538070 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
UBE3B-208ENST00000538070 PTPDC1A2A3K4 754 aa10.27□□□□□ -0.77
UBE3B-208ENST00000538070 NPHP1O15259 732 aa10.27□□□□□ -0.77
UBE3B-208ENST00000538070 SF3A1Q15459 793 aaKnown RBP10.27□□□□□ -0.77
UBE3B-208ENST00000538070 PPP1R9BQ96SB3 815 aa10.27□□□□□ -0.77
UBE3B-208ENST00000538070 PUS7LQ9H0K6 701 aaKnown RBP10.27□□□□□ -0.77
UBE3B-208ENST00000538070 DENND2AQ9ULE3 1009 aa10.27□□□□□ -0.77
UBE3B-208ENST00000538070 ANKRD18BA2A2Z9 1011 aa10.26□□□□□ -0.77
UBE3B-208ENST00000538070 ME1P48163 572 aa10.26□□□□□ -0.77
UBE3B-208ENST00000538070 DHX32Q7L7V1 743 aaKnown RBP10.26□□□□□ -0.77
UBE3B-208ENST00000538070 GNL2Q13823 731 aaKnown RBP10.26□□□□□ -0.77
UBE3B-208ENST00000538070 NFXL1Q6ZNB6 911 aa10.26□□□□□ -0.77
UBE3B-208ENST00000538070 LUZP1Q86V48 1076 aa10.26□□□□□ -0.77
UBE3B-208ENST00000538070 MPHOSPH8Q99549 860 aa10.26□□□□□ -0.77
UBE3B-208ENST00000538070 GTF3C6Q969F1 213 aa10.26□□□□□ -0.77
UBE3B-208ENST00000538070 MED23Q9ULK4 1368 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 KLF18A0A0U1RQI7 1052 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms