RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 NIP7Q9Y221 180 aaKnown RBP eCLIP27.3■■□□□ 1.96
HMGA2-206ENST00000536545 LY75O60449 1722 aa27.3■■□□□ 1.96
HMGA2-206ENST00000536545 ARAP2Q8WZ64 1704 aa27.3■■□□□ 1.96
HMGA2-206ENST00000536545 SBF2Q86WG5 1849 aa27.3■■□□□ 1.96
HMGA2-206ENST00000536545 TAF5LO75529 589 aa27.3■■□□□ 1.96
HMGA2-206ENST00000536545 ATP2B3Q16720 1220 aa27.3■■□□□ 1.96
HMGA2-206ENST00000536545 CNNM1Q9NRU3 951 aa27.3■■□□□ 1.96
HMGA2-206ENST00000536545 RTL9Q8NET4 1388 aa27.3■■□□□ 1.96
HMGA2-206ENST00000536545 RPAP1Q9BWH6 1393 aaPredicted RBP27.3■■□□□ 1.96
HMGA2-206ENST00000536545 RGL2O15211 777 aa27.29■■□□□ 1.96
HMGA2-206ENST00000536545 CYP2E1P05181 493 aaPredicted RBP27.29■■□□□ 1.96
HMGA2-206ENST00000536545 HCLS1P14317 486 aaPredicted RBP27.29■■□□□ 1.96
HMGA2-206ENST00000536545 CLEC4GQ6UXB4 293 aa27.29■■□□□ 1.96
HMGA2-206ENST00000536545 SLC27A2O14975 620 aa27.28■■□□□ 1.96
HMGA2-206ENST00000536545 CHGBP05060 677 aa27.28■■□□□ 1.96
HMGA2-206ENST00000536545 SSFA2P28290 1259 aa27.28■■□□□ 1.96
HMGA2-206ENST00000536545 KCNQ4P56696 695 aa27.28■■□□□ 1.96
HMGA2-206ENST00000536545 CCDC158Q5M9N0 1113 aa27.28■■□□□ 1.96
HMGA2-206ENST00000536545 ONECUT3O60422 494 aaPredicted RBP27.27■■□□□ 1.96
HMGA2-206ENST00000536545 ADCK5Q3MIX3 580 aa27.27■■□□□ 1.96
HMGA2-206ENST00000536545 TTC39AQ5SRH9 613 aa27.27■■□□□ 1.96
HMGA2-206ENST00000536545 RC3H1Q5TC82 1133 aaKnown RBP27.27■■□□□ 1.96
HMGA2-206ENST00000536545 ZKSCAN1P17029 563 aaPredicted RBP27.27■■□□□ 1.96
HMGA2-206ENST00000536545 CASTP20810 708 aaKnown RBP27.27■■□□□ 1.96
HMGA2-206ENST00000536545 KCNJ4P48050 445 aa27.27■■□□□ 1.96
HMGA2-206ENST00000536545 MCMDC2Q4G0Z9 681 aa27.27■■□□□ 1.96
HMGA2-206ENST00000536545 USPL1Q5W0Q7 1092 aa27.27■■□□□ 1.96
HMGA2-206ENST00000536545 INTS4Q96HW7 963 aaKnown RBP27.27■■□□□ 1.96
HMGA2-206ENST00000536545 JAKMIP1Q96N16 626 aaKnown RBP27.27■■□□□ 1.96
HMGA2-206ENST00000536545 ZSWIM6Q9HCJ5 1215 aa27.27■■□□□ 1.96
HMGA2-206ENST00000536545 FAM177BA6PVY3 158 aa27.26■■□□□ 1.95
HMGA2-206ENST00000536545 NUCB2P80303 420 aa27.26■■□□□ 1.95
HMGA2-206ENST00000536545 CLEC17AQ6ZS10 378 aa27.26■■□□□ 1.95
HMGA2-206ENST00000536545 NOL8Q76FK4 1167 aaKnown RBP27.26■■□□□ 1.95
HMGA2-206ENST00000536545 DDX11L8A8MPP1 907 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 HSP90B1P14625 803 aaKnown RBP27.25■■□□□ 1.95
HMGA2-206ENST00000536545 FAM182BQ5T319 152 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 GORABQ5T7V8 394 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 GBP4Q96PP9 640 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 TAF1LQ8IZX4 1826 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 AK2P54819 239 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 SEC62Q99442 399 aaKnown RBP27.25■■□□□ 1.95
HMGA2-206ENST00000536545 HELLSQ9NRZ9 838 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 HMG20BQ9P0W2 317 aa27.25■■□□□ 1.95
HMGA2-206ENST00000536545 TRPC5Q9UL62 973 aaPredicted RBP27.25■■□□□ 1.95
HMGA2-206ENST00000536545 COL24A1Q17RW2 1714 aa27.24■■□□□ 1.95
HMGA2-206ENST00000536545 MROH5Q6ZUA9 1318 aa27.24■■□□□ 1.95
HMGA2-206ENST00000536545 ZMYM1Q5SVZ6 1142 aa27.24■■□□□ 1.95
HMGA2-206ENST00000536545 RNF20Q5VTR2 975 aa27.24■■□□□ 1.95
HMGA2-206ENST00000536545 CCDC129Q6ZRS4 1044 aa27.24■■□□□ 1.95
HMGA2-206ENST00000536545 PDE8BO95263 885 aa27.23■■□□□ 1.95
HMGA2-206ENST00000536545 SCARF1Q14162 830 aa27.23■■□□□ 1.95
HMGA2-206ENST00000536545 VPS53Q5VIR6 699 aa27.23■■□□□ 1.95
HMGA2-206ENST00000536545 TSGA10IPQ3SY00 556 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 CCDC152Q4G0S7 254 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 RUFY3Q7L099 469 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 ZNF512BQ96KM6 892 aaPredicted RBP27.22■■□□□ 1.95
HMGA2-206ENST00000536545 AKAP11Q9UKA4 1901 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 RPS6KA4O75676 772 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 CPA1P15085 419 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 PKP1Q13835 747 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 CYP46A1Q9Y6A2 500 aa27.22■■□□□ 1.95
HMGA2-206ENST00000536545 RNF113AO15541 343 aaKnown RBP27.21■■□□□ 1.95
HMGA2-206ENST00000536545 GSE1Q14687 1217 aa27.21■■□□□ 1.95
HMGA2-206ENST00000536545 CCNL1Q9UK58 526 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-206ENST00000536545 U3KPZ7 1027 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-206ENST00000536545 FGFR2P21802 821 aa27.2■■□□□ 1.95
HMGA2-206ENST00000536545 PUM3Q15397 648 aaKnown RBP27.2■■□□□ 1.95
HMGA2-206ENST00000536545 BCL2L12Q9HB09 334 aa27.2■■□□□ 1.95
HMGA2-206ENST00000536545 SEC31BQ9NQW1 1179 aa27.2■■□□□ 1.95
HMGA2-206ENST00000536545 LIMCH1Q9UPQ0 1083 aa27.2■■□□□ 1.95
HMGA2-206ENST00000536545 TAF6LQ9Y6J9 622 aa27.2■■□□□ 1.95
HMGA2-206ENST00000536545 CASZ1Q86V15 1759 aa27.2■■□□□ 1.95
HMGA2-206ENST00000536545 FKBP4Q02790 459 aaKnown RBP eCLIP27.2■■□□□ 1.943e-6■■□□□ 13
HMGA2-206ENST00000536545 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
HMGA2-206ENST00000536545 SEPT12Q8IYM1 358 aa27.2■■□□□ 1.94
HMGA2-206ENST00000536545 PDRG1Q9NUG6 133 aa27.2■■□□□ 1.94
HMGA2-206ENST00000536545 MAST3O60307 1309 aa27.19■■□□□ 1.94
HMGA2-206ENST00000536545 COL4A1P02462 1669 aa27.19■■□□□ 1.94
HMGA2-206ENST00000536545 PSMA5P28066 241 aa27.19■■□□□ 1.94
HMGA2-206ENST00000536545 SLFNL1Q499Z3 407 aa27.19■■□□□ 1.94
HMGA2-206ENST00000536545 NARFQ9UHQ1 456 aa27.19■■□□□ 1.94
HMGA2-206ENST00000536545 C4BP0C0L5 1744 aa27.18■■□□□ 1.94
HMGA2-206ENST00000536545 ZAP70P43403 619 aa27.18■■□□□ 1.94
HMGA2-206ENST00000536545 MYH7P12883 1935 aa27.18■■□□□ 1.94
HMGA2-206ENST00000536545 MCAMP43121 646 aa27.17■■□□□ 1.94
HMGA2-206ENST00000536545 ZDHHC9Q9Y397 364 aa27.17■■□□□ 1.94
HMGA2-206ENST00000536545 C4AP0C0L4 1744 aa27.17■■□□□ 1.94
HMGA2-206ENST00000536545 GNPATO15228 680 aa27.17■■□□□ 1.94
HMGA2-206ENST00000536545 LRRFIP1Q32MZ4 808 aaKnown RBP27.17■■□□□ 1.94
HMGA2-206ENST00000536545 SMIM5Q71RC9 77 aa27.17■■□□□ 1.94
HMGA2-206ENST00000536545 LPIN2Q92539 896 aa27.17■■□□□ 1.94
HMGA2-206ENST00000536545 DSCC1Q9BVC3 393 aa27.17■■□□□ 1.94
HMGA2-206ENST00000536545 ZFYP08048 801 aaPredicted RBP27.16■■□□□ 1.94
HMGA2-206ENST00000536545 ARID4AP29374 1257 aaPredicted RBP27.16■■□□□ 1.94
HMGA2-206ENST00000536545 ERFEQ4G0M1 354 aa27.16■■□□□ 1.94
HMGA2-206ENST00000536545 PI16Q6UXB8 463 aa27.16■■□□□ 1.94
HMGA2-206ENST00000536545 BAG4O95429 457 aaKnown RBP27.15■■□□□ 1.94
HMGA2-206ENST00000536545 TBC1D9BQ66K14 1250 aa27.15■■□□□ 1.94
HMGA2-206ENST00000536545 MPHOSPH8Q99549 860 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms