RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 ATG9AQ7Z3C6 839 aa25.54■■□□□ 1.68
TRIM3-214ENST00000536344 FAM227BQ96M60 508 aa25.54■■□□□ 1.68
TRIM3-214ENST00000536344 DNAJC2Q99543 621 aaKnown RBP25.54■■□□□ 1.68
TRIM3-214ENST00000536344 PIBF1Q8WXW3 757 aa25.54■■□□□ 1.68
TRIM3-214ENST00000536344 GTPBP4Q9BZE4 634 aaKnown RBP25.54■■□□□ 1.68
TRIM3-214ENST00000536344 U2AF2P26368 475 aaKnown RBP eCLIP25.53■■□□□ 1.68
TRIM3-214ENST00000536344 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
TRIM3-214ENST00000536344 BARGINQ6ZT62 677 aa25.53■■□□□ 1.68
TRIM3-214ENST00000536344 NLRP10Q86W26 655 aa25.53■■□□□ 1.68
TRIM3-214ENST00000536344 JCADQ9P266 1359 aa25.53■■□□□ 1.68
TRIM3-214ENST00000536344 USP42Q9H9J4 1324 aaKnown RBP25.53■■□□□ 1.68
TRIM3-214ENST00000536344 CWC22Q9HCG8 908 aaKnown RBP25.53■■□□□ 1.68
TRIM3-214ENST00000536344 TRMT112Q9UI30 125 aaKnown RBP25.53■■□□□ 1.68
TRIM3-214ENST00000536344 KIF3AQ9Y496 699 aa25.53■■□□□ 1.68
TRIM3-214ENST00000536344 NEK4P51957 841 aa25.52■■□□□ 1.68
TRIM3-214ENST00000536344 MEX3CQ5U5Q3 659 aaKnown RBP25.52■■□□□ 1.68
TRIM3-214ENST00000536344 HSPA1LP34931 641 aa25.52■■□□□ 1.68
TRIM3-214ENST00000536344 PRIMPOLQ96LW4 560 aa25.52■■□□□ 1.68
TRIM3-214ENST00000536344 PALLDQ8WX93 1383 aa25.52■■□□□ 1.68
TRIM3-214ENST00000536344 SGSM2O43147 1006 aa25.51■■□□□ 1.67
TRIM3-214ENST00000536344 GADD45BO75293 160 aaPredicted RBP25.51■■□□□ 1.67
TRIM3-214ENST00000536344 GTF2F1P35269 517 aaKnown RBP eCLIP25.51■■□□□ 1.67
TRIM3-214ENST00000536344 CCDC57Q2TAC2 916 aa25.51■■□□□ 1.67
TRIM3-214ENST00000536344 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
TRIM3-214ENST00000536344 FSD1Q9BTV5 496 aa25.51■■□□□ 1.67
TRIM3-214ENST00000536344 ZBTB22O15209 634 aa25.5■■□□□ 1.67
TRIM3-214ENST00000536344 UBN2Q6ZU65 1347 aa25.5■■□□□ 1.67
TRIM3-214ENST00000536344 KIF20AO95235 890 aa25.5■■□□□ 1.67
TRIM3-214ENST00000536344 HMGN5P82970 282 aaKnown RBP25.5■■□□□ 1.67
TRIM3-214ENST00000536344 SLFNL1Q499Z3 407 aa25.5■■□□□ 1.67
TRIM3-214ENST00000536344 CCDC87Q9NVE4 849 aa25.5■■□□□ 1.67
TRIM3-214ENST00000536344 LRP6O75581 1613 aa25.5■■□□□ 1.67
TRIM3-214ENST00000536344 PTH1RQ03431 593 aa25.5■■□□□ 1.67
TRIM3-214ENST00000536344 VPS72Q15906 364 aa25.49■■□□□ 1.67
TRIM3-214ENST00000536344 TAF7LQ5H9L4 462 aa25.49■■□□□ 1.67
TRIM3-214ENST00000536344 ZBTB38Q8NAP3 1195 aaPredicted RBP25.49■■□□□ 1.67
TRIM3-214ENST00000536344 LARP6Q9BRS8 491 aaKnown RBP25.49■■□□□ 1.67
TRIM3-214ENST00000536344 ST18O60284 1047 aa25.48■■□□□ 1.67
TRIM3-214ENST00000536344 DDX46Q7L014 1031 aaKnown RBP25.48■■□□□ 1.67
TRIM3-214ENST00000536344 GREM2Q9H772 168 aa25.48■■□□□ 1.67
TRIM3-214ENST00000536344 PCCAP05165 728 aaPredicted RBP25.48■■□□□ 1.67
TRIM3-214ENST00000536344 HCLS1P14317 486 aaPredicted RBP25.48■■□□□ 1.67
TRIM3-214ENST00000536344 IL6STP40189 918 aaPredicted RBP25.48■■□□□ 1.67
TRIM3-214ENST00000536344 NMIQ13287 307 aaPredicted RBP25.48■■□□□ 1.67
TRIM3-214ENST00000536344 EVI5LQ96CN4 794 aa25.48■■□□□ 1.67
TRIM3-214ENST00000536344 MYH14Q7Z406 1995 aaKnown RBP25.47■■□□□ 1.67
TRIM3-214ENST00000536344 PDE4CQ08493 712 aa25.47■■□□□ 1.67
TRIM3-214ENST00000536344 PDCL2Q8N4E4 241 aa25.47■■□□□ 1.67
TRIM3-214ENST00000536344 EYA2O00167 538 aa25.47■■□□□ 1.67
TRIM3-214ENST00000536344 CPA1P15085 419 aa25.47■■□□□ 1.67
TRIM3-214ENST00000536344 CERKQ8TCT0 537 aa25.47■■□□□ 1.67
TRIM3-214ENST00000536344 A0A0D9SFI3 127 aa25.46■■□□□ 1.67
TRIM3-214ENST00000536344 IRS4O14654 1257 aaPredicted RBP25.46■■□□□ 1.67
TRIM3-214ENST00000536344 LETM1O95202 739 aaPredicted RBP25.46■■□□□ 1.67
TRIM3-214ENST00000536344 EIF5P55010 431 aaKnown RBP25.46■■□□□ 1.67
TRIM3-214ENST00000536344 RASEFQ8IZ41 740 aa25.46■■□□□ 1.67
TRIM3-214ENST00000536344 LSG1Q9H089 658 aaKnown RBP25.46■■□□□ 1.67
TRIM3-214ENST00000536344 DTNBO60941 627 aa25.45■■□□□ 1.67
TRIM3-214ENST00000536344 ADCY5O95622 1261 aa25.45■■□□□ 1.67
TRIM3-214ENST00000536344 MBD3O95983 291 aa25.45■■□□□ 1.67
TRIM3-214ENST00000536344 MCCP23508 829 aa25.45■■□□□ 1.66
TRIM3-214ENST00000536344 NWD2Q9ULI1 1742 aa25.45■■□□□ 1.66
TRIM3-214ENST00000536344 TRIM28Q13263 835 aaKnown RBP25.44■■□□□ 1.66
TRIM3-214ENST00000536344 IFIT5Q13325 482 aaKnown RBP25.44■■□□□ 1.66
TRIM3-214ENST00000536344 GOLGB1Q14789 3259 aaKnown RBP25.44■■□□□ 1.66
TRIM3-214ENST00000536344 COL15A1P39059 1388 aa25.44■■□□□ 1.66
TRIM3-214ENST00000536344 PLCB2Q00722 1185 aa25.44■■□□□ 1.66
TRIM3-214ENST00000536344 FNBP4Q8N3X1 1017 aaPredicted RBP25.44■■□□□ 1.66
TRIM3-214ENST00000536344 ITGA6P23229 1130 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 ADORA1P30542 326 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 SUSD4Q5VX71 490 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 SNRKQ9NRH2 765 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 TMEM51Q9NW97 253 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 NUP98P52948 1817 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 A0A1B0GUL7 405 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 LINC00116Q8NCU8 138 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 TTLL11Q8NHH1 800 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 TMX3Q96JJ7 454 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 SEC62Q99442 399 aaKnown RBP25.43■■□□□ 1.66
TRIM3-214ENST00000536344 VGLL3A8MV65 326 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 RIOK3O14730 519 aaKnown RBP25.43■■□□□ 1.66
TRIM3-214ENST00000536344 IL15P40933 162 aaPredicted RBP25.43■■□□□ 1.66
TRIM3-214ENST00000536344 BICDL1Q6ZP65 573 aa25.43■■□□□ 1.66
TRIM3-214ENST00000536344 CGNQ9P2M7 1197 aaKnown RBP25.42■■□□□ 1.66
TRIM3-214ENST00000536344 PRPF40BQ6NWY9 871 aaKnown RBP25.42■■□□□ 1.66
TRIM3-214ENST00000536344 CCDC129Q6ZRS4 1044 aa25.42■■□□□ 1.66
TRIM3-214ENST00000536344 ZNF589Q86UQ0 364 aaPredicted RBP25.42■■□□□ 1.66
TRIM3-214ENST00000536344 RAD50Q92878 1312 aa25.42■■□□□ 1.66
TRIM3-214ENST00000536344 GOLIM4O00461 696 aa25.41■■□□□ 1.66
TRIM3-214ENST00000536344 HELBQ8NG08 1087 aaPredicted RBP25.41■■□□□ 1.66
TRIM3-214ENST00000536344 HSPA4P34932 840 aa25.41■■□□□ 1.66
TRIM3-214ENST00000536344 CEP126Q9P2H0 1117 aa25.41■■□□□ 1.66
TRIM3-214ENST00000536344 BRD1O95696 1058 aa25.4■■□□□ 1.66
TRIM3-214ENST00000536344 ATP5JP18859 108 aa25.4■■□□□ 1.66
TRIM3-214ENST00000536344 COL9A3Q14050 684 aaPredicted RBP25.4■■□□□ 1.66
TRIM3-214ENST00000536344 SNAP23O00161 211 aa25.4■■□□□ 1.66
TRIM3-214ENST00000536344 HSP90AB3PQ58FF7 597 aa25.4■■□□□ 1.66
TRIM3-214ENST00000536344 LDHAL6AQ6ZMR3 332 aa25.4■■□□□ 1.66
TRIM3-214ENST00000536344 NIP7Q9Y221 180 aaKnown RBP eCLIP25.4■■□□□ 1.66
TRIM3-214ENST00000536344 AFF2P51816 1311 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms