RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 SOX18P35713 384 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 GRIK1P39086 918 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 NFIAQ12857 509 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 GALNT11Q8NCW6 608 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 TRIM33Q9UPN9 1127 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 PPME1Q9Y570 386 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 KCNMB2Q9Y691 235 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 WEE1P30291 646 aa6□□□□□ -1.45
SKA3-207ENST00000536239 FZD5Q13467 585 aa6□□□□□ -1.45
SKA3-207ENST00000536239 TPRNQ4KMQ1 711 aa6□□□□□ -1.45
SKA3-207ENST00000536239 ANKMY2Q8IV38 441 aa6□□□□□ -1.45
SKA3-207ENST00000536239 RGL4Q8IZJ4 473 aa6□□□□□ -1.45
SKA3-207ENST00000536239 VTI1AQ96AJ9 217 aa6□□□□□ -1.45
SKA3-207ENST00000536239 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
SKA3-207ENST00000536239 CEP41Q9BYV8 373 aa6□□□□□ -1.45
SKA3-207ENST00000536239 LRFN2Q9ULH4 789 aa6□□□□□ -1.45
SKA3-207ENST00000536239 PRR19A6NJB7 356 aa5.99□□□□□ -1.45
SKA3-207ENST00000536239 LINC01387J3KSC0 135 aa5.99□□□□□ -1.45
SKA3-207ENST00000536239 WISP1O95388 367 aa5.99□□□□□ -1.45
SKA3-207ENST00000536239 UVSSAQ2YD98 709 aa5.99□□□□□ -1.45
SKA3-207ENST00000536239 KANK4Q5T7N3 995 aaPredicted RBP5.99□□□□□ -1.45
SKA3-207ENST00000536239 DTX1Q86Y01 620 aa5.99□□□□□ -1.45
SKA3-207ENST00000536239 TREML1Q86YW5 311 aa5.99□□□□□ -1.45
SKA3-207ENST00000536239 C7orf69Q9H7B7 122 aa5.99□□□□□ -1.45
SKA3-207ENST00000536239 FAM196BA6NMK8 535 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L15C9J2P7 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L10C9JJH3 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L13C9JLJ4 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L12C9JPN9 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L11C9JVI0 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L21D6R901 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L18D6R9N7 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L22D6RA61 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L17D6RBQ6 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L19D6RCP7 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L20D6RJB6 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 CD68P34810 354 aaPredicted RBP5.98□□□□□ -1.45
SKA3-207ENST00000536239 USP17L24Q0WX57 530 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 FLIIQ13045 1269 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 RNF43Q68DV7 783 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 ACAD11Q709F0 780 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 TRIM42Q8IWZ5 723 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 UTP4Q969X6 686 aaKnown RBP5.98□□□□□ -1.45
SKA3-207ENST00000536239 FAM46AQ96IP4 442 aaKnown RBP5.98□□□□□ -1.45
SKA3-207ENST00000536239 DBNDD2Q9BQY9 259 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.98□□□□□ -1.45
SKA3-207ENST00000536239 KCNK4Q9NYG8 393 aa5.98□□□□□ -1.45
SKA3-207ENST00000536239 HMX2A2RU54 273 aa5.97□□□□□ -1.45
SKA3-207ENST00000536239 TM4SF5O14894 197 aa5.97□□□□□ -1.45
SKA3-207ENST00000536239 WNT11O96014 354 aa5.97□□□□□ -1.45
SKA3-207ENST00000536239 GLMNQ92990 594 aa5.97□□□□□ -1.45
SKA3-207ENST00000536239 KIAA1211Q6ZU35 1233 aa5.96□□□□□ -1.46
SKA3-207ENST00000536239 NLRP13Q86W25 1043 aa5.96□□□□□ -1.46
SKA3-207ENST00000536239 MYRFLQ96LU7 910 aa5.96□□□□□ -1.46
SKA3-207ENST00000536239 ARXQ96QS3 562 aa5.96□□□□□ -1.46
SKA3-207ENST00000536239 COX20Q5RI15 118 aa5.95□□□□□ -1.46
SKA3-207ENST00000536239 TXNDC11Q6PKC3 985 aa5.95□□□□□ -1.46
SKA3-207ENST00000536239 CLEC10AQ8IUN9 316 aa5.95□□□□□ -1.46
SKA3-207ENST00000536239 PPP1R12CQ9BZL4 782 aa5.95□□□□□ -1.46
SKA3-207ENST00000536239 LACRTQ9GZZ8 138 aa5.95□□□□□ -1.46
SKA3-207ENST00000536239 VRTNQ9H8Y1 702 aa5.95□□□□□ -1.46
SKA3-207ENST00000536239 ADGRE2Q9UHX3 823 aa5.95□□□□□ -1.46
SKA3-207ENST00000536239 CDC27P30260 824 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 ATP11AP98196 1134 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 DUOXA2Q1HG44 320 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 COL13A1Q5TAT6 717 aaPredicted RBP5.94□□□□□ -1.46
SKA3-207ENST00000536239 CEP135Q66GS9 1140 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 FAM20CQ8IXL6 584 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 OR13H1Q8NG92 308 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 SHKBP1Q8TBC3 707 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 FAM83CQ9BQN1 747 aa5.94□□□□□ -1.46
SKA3-207ENST00000536239 FSCN2O14926 492 aa5.93□□□□□ -1.46
SKA3-207ENST00000536239 SMNDC1O75940 238 aaKnown RBP eCLIP5.93□□□□□ -1.46
SKA3-207ENST00000536239 HYAL2Q12891 473 aa5.93□□□□□ -1.46
SKA3-207ENST00000536239 TRIP4Q15650 581 aaPredicted RBP5.93□□□□□ -1.46
SKA3-207ENST00000536239 KLHL23Q8NBE8 558 aa5.93□□□□□ -1.46
SKA3-207ENST00000536239 SPACA7Q96KW9 195 aa5.93□□□□□ -1.46
SKA3-207ENST00000536239 CARD10Q9BWT7 1032 aa5.93□□□□□ -1.46
SKA3-207ENST00000536239 DDX3YO15523 660 aaKnown RBP5.92□□□□□ -1.46
SKA3-207ENST00000536239 CDC25BP30305 580 aa5.92□□□□□ -1.46
SKA3-207ENST00000536239 FAM117BQ6P1L5 589 aa5.92□□□□□ -1.46
SKA3-207ENST00000536239 ADAMTSL4Q6UY14 1074 aa5.92□□□□□ -1.46
SKA3-207ENST00000536239 BEND4Q6ZU67 534 aa5.92□□□□□ -1.46
SKA3-207ENST00000536239 ETFBKMTQ8IXQ9 262 aa5.92□□□□□ -1.46
SKA3-207ENST00000536239 FNBP4Q8N3X1 1017 aaPredicted RBP5.92□□□□□ -1.46
SKA3-207ENST00000536239 FOXD4L4Q8WXT5 416 aaPredicted RBP5.92□□□□□ -1.46
SKA3-207ENST00000536239 UBAP1LF5GYI3 381 aa5.91□□□□□ -1.46
SKA3-207ENST00000536239 ADAM11O75078 769 aa5.91□□□□□ -1.46
SKA3-207ENST00000536239 BMP3P12645 472 aa5.91□□□□□ -1.46
SKA3-207ENST00000536239 LMOD1P29536 600 aaPredicted RBP5.91□□□□□ -1.46
SKA3-207ENST00000536239 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.91□□□□□ -1.46
SKA3-207ENST00000536239 RASSF4Q9H2L5 321 aa5.91□□□□□ -1.46
SKA3-207ENST00000536239 KCNF1Q9H3M0 494 aa5.91□□□□□ -1.46
SKA3-207ENST00000536239 WDR64B1ANS9 1081 aa5.9□□□□□ -1.46
SKA3-207ENST00000536239 SART1O43290 800 aaKnown RBP5.9□□□□□ -1.46
SKA3-207ENST00000536239 BRD2P25440 801 aaKnown RBP5.9□□□□□ -1.46
SKA3-207ENST00000536239 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
SKA3-207ENST00000536239 FKBP5Q13451 457 aaPredicted RBP5.9□□□□□ -1.46
SKA3-207ENST00000536239 FAM200AQ8TCP9 573 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms