RNA–Protein interactions for RNA: ENST00000533701.1

AP004242.1-201, humanhuman

BASIC

Gene AP004242.1, Length 349 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004242.1-201ENST00000533701 PDE6BP35913 854 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 GRM5P41594 1212 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 USP5P45974 858 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 CASC1Q6TDU7 716 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 USP48Q86UV5 1035 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 VPS37DQ86XT2 251 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 CREBRFQ8IUR6 639 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 WDR75Q8IWA0 830 aaKnown RBP4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 ZNF511Q8NB15 262 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 RUNDC1Q96C34 613 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 NEUROD6Q96NK8 337 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 DUSP9Q99956 384 aaKnown RBP4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 RBCK1Q9BYM8 510 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 SLKQ9H2G2 1235 aaPredicted RBP4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 ARNT2Q9HBZ2 717 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 HOMER2Q9NSB8 354 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 CXXC1Q9P0U4 656 aaPredicted RBP4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 VTI1BQ9UEU0 232 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 NUB1Q9Y5A7 615 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 EMILIN1Q9Y6C2 1016 aa4.81□□□□□ -1.64
AP004242.1-201ENST00000533701 SENP3-EIF4A1A0A087X0R7 540 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 TREHO43280 583 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 LDHCP07864 332 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 BCRP11274 1271 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 FKBP4Q02790 459 aaKnown RBP eCLIP4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 OCLNQ16625 522 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 ZNF394Q53GI3 561 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 NUTM1Q86Y26 1132 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 DRC7Q8IY82 874 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 CKAP2LQ8IYA6 745 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 ZNF654Q8IZM8 581 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 DEPDC4Q8N2C3 294 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 LRRN4Q8WUT4 740 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 CDK15Q96Q40 435 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 TSPAN18Q96SJ8 248 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 ZNF700Q9H0M5 742 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 ZHX3Q9H4I2 956 aa4.8□□□□□ -1.64
AP004242.1-201ENST00000533701 GOLGA6CA6NDK9 693 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 GOLGA6BA6NDN3 693 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 ATP5J2-PTCD1G3V325 749 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 TSPAN6O43657 245 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 DHX16O60231 1041 aaKnown RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 CDC45O75419 566 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 BPNT1O95861 308 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 LDHBP07195 334 aaKnown RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 GOLGA6DP0CG33 693 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 ATF4P18848 351 aaPredicted RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 POLD1P28340 1107 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 MASP1P48740 699 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 EXOSC10Q01780 885 aaKnown RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 DPYDQ12882 1025 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 PSMD2Q13200 908 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 SF3B2Q13435 895 aaKnown RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 RAPGEF1Q13905 1077 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 KCTD2Q14681 263 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 ARID5BQ14865 1188 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 BRD3Q15059 726 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 NFE2Q16621 373 aaPredicted RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 TMEM95Q3KNT9 176 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 ARSHQ5FYA8 562 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 PGBD3Q8N328 593 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 FAM174AQ8TBP5 190 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 GTF3C2Q8WUA4 911 aaPredicted RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 ACDQ96AP0 544 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 RSPH9Q9H1X1 276 aaPredicted RBP4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 ZBTB3Q9H5J0 574 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 FANCLQ9NW38 375 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 GOLGA6AQ9NYA3 693 aa4.79□□□□□ -1.64
AP004242.1-201ENST00000533701 A6NJY4 79 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 C1QTNF9BB2RNN3 333 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 TBX3O15119 743 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 KRT18P05783 430 aaKnown RBP4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 DSC3Q14574 896 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 BRDTQ58F21 947 aaPredicted RBP4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 KIAA0907Q7Z7F0 614 aaPredicted RBP4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 PAF1Q8N7H5 531 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 ZNF622Q969S3 477 aaKnown RBP eCLIP4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 CDC5LQ99459 802 aaKnown RBP4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 KANSL2Q9H9L4 492 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 SRA1Q9HD15 236 aaKnown RBP4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 CNTN3Q9P232 1028 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 MKL2Q9ULH7 1088 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 LZTS1Q9Y250 596 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 PCDHGB7Q9Y5F8 929 aa4.78□□□□□ -1.64
AP004242.1-201ENST00000533701 CCDC163A0A0D9SF12 145 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 CLGNO14967 610 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 MYL1P05976 194 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 CDC27P30260 824 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 CTHP32929 405 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 GJA8P48165 433 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 MTMR3Q13615 1198 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 DOC2BQ14184 412 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 SIM2Q14190 667 aaPredicted RBP4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 PPP2R5AQ15172 486 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 NBPF1Q3BBV0 1214 aa4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 INO80DQ53TQ3 878 aaPredicted RBP4.77□□□□□ -1.65
AP004242.1-201ENST00000533701 C10orf62Q5T681 223 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms