RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 VEGFAP15692 232 aaPredicted RBP11.32□□□□□ -0.6
PTP4A2-213ENST00000532001 HLFQ16534 295 aa11.32□□□□□ -0.6
PTP4A2-213ENST00000532001 CRY2Q49AN0 593 aa11.32□□□□□ -0.6
PTP4A2-213ENST00000532001 KIF6Q6ZMV9 814 aa11.32□□□□□ -0.6
PTP4A2-213ENST00000532001 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
PTP4A2-213ENST00000532001 SMC1BQ8NDV3 1235 aa11.32□□□□□ -0.6
PTP4A2-213ENST00000532001 NYXQ9GZU5 481 aa11.32□□□□□ -0.6
PTP4A2-213ENST00000532001 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
PTP4A2-213ENST00000532001 OSBPP22059 807 aa11.31□□□□□ -0.6
PTP4A2-213ENST00000532001 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
PTP4A2-213ENST00000532001 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
PTP4A2-213ENST00000532001 CCDC93Q567U6 631 aa11.31□□□□□ -0.6
PTP4A2-213ENST00000532001 LRP10Q7Z4F1 713 aa11.31□□□□□ -0.6
PTP4A2-213ENST00000532001 TSPYL4Q9UJ04 414 aa11.31□□□□□ -0.6
PTP4A2-213ENST00000532001 POTECB2RU33 542 aa11.3□□□□□ -0.6
PTP4A2-213ENST00000532001 RIPK4P57078 832 aa11.3□□□□□ -0.6
PTP4A2-213ENST00000532001 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
PTP4A2-213ENST00000532001 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 ALDH1B1P30837 517 aa11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 ZNF34Q8IZ26 560 aa11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 RRP7AQ9Y3A4 280 aaKnown RBP11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 UBN2Q6ZU65 1347 aa11.29□□□□□ -0.6
PTP4A2-213ENST00000532001 LAMB2P55268 1798 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 MYL6BP14649 208 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
PTP4A2-213ENST00000532001 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 CHL1O00533 1208 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 NTSR2O95665 410 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 NGEFQ8N5V2 710 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 JMYQ8N9B5 988 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 KLRG1Q96E93 195 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 PSMD1Q99460 953 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 ZBTB3Q9H5J0 574 aa11.27□□□□□ -0.61
PTP4A2-213ENST00000532001 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 HOXB7P09629 217 aa11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 WDR43Q15061 677 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 SUSD4Q5VX71 490 aa11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 WNT2BQ93097 391 aa11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 CRAMP1Q96RY5 1269 aa11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 MRS2Q9HD23 443 aa11.26□□□□□ -0.61
PTP4A2-213ENST00000532001 IQCA1LA6NCM1 817 aa11.25□□□□□ -0.61
PTP4A2-213ENST00000532001 GPTP24298 496 aa11.25□□□□□ -0.61
PTP4A2-213ENST00000532001 PROSER3Q2NL68 480 aa11.25□□□□□ -0.61
PTP4A2-213ENST00000532001 HSP90AB3PQ58FF7 597 aa11.25□□□□□ -0.61
PTP4A2-213ENST00000532001 SLC10A5Q5PT55 438 aa11.25□□□□□ -0.61
PTP4A2-213ENST00000532001 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
PTP4A2-213ENST00000532001 DDNO94850 711 aaPredicted RBP11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 IARSP41252 1262 aaKnown RBP11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 CCDC146Q8IYE0 955 aa11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 ZNF277Q9NRM2 450 aaPredicted RBP11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 COL4A5P29400 1685 aa11.24□□□□□ -0.61
PTP4A2-213ENST00000532001 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 FZD9O00144 591 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 EIF2S2P20042 333 aaKnown RBP11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 HTRA3P83110 453 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 SYNE4Q8N205 404 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 ADAMTS8Q9UP79 889 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 ZNF541Q9H0D2 1346 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 PCNTO95613 3336 aa11.23□□□□□ -0.61
PTP4A2-213ENST00000532001 ANXA1P04083 346 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 MLLT3P42568 568 aaPredicted RBP11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 PRSS12P56730 875 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 NLRP10Q86W26 655 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 LDHDQ86WU2 507 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 XAGE3Q8WTP9 111 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 NLRP3Q96P20 1036 aa11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 TAF1DQ9H5J8 278 aaPredicted RBP11.22□□□□□ -0.61
PTP4A2-213ENST00000532001 PPEF1O14829 653 aaPredicted RBP11.21□□□□□ -0.61
PTP4A2-213ENST00000532001 TCIRG1Q13488 830 aa11.21□□□□□ -0.61
PTP4A2-213ENST00000532001 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
PTP4A2-213ENST00000532001 GPC2Q8N158 579 aa11.21□□□□□ -0.61
PTP4A2-213ENST00000532001 ANKK1Q8NFD2 765 aa11.21□□□□□ -0.61
PTP4A2-213ENST00000532001 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
PTP4A2-213ENST00000532001 LTBP1Q14766 1721 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms