RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PLCD3Q8N3E9 789 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 CRAMP1Q96RY5 1269 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 TMX4Q9H1E5 349 aaPredicted RBP4.69□□□□□ -1.66
PTPRC-213ENST00000529828 ATP6V0A2Q9Y487 856 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 SZT2Q5T011 3432 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 LAMB4A4D0S4 1761 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 YDJCA8MPS7 323 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 ERVV-1B6SEH8 477 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 HCLS1P14317 486 aaPredicted RBP4.68□□□□□ -1.66
PTPRC-213ENST00000529828 NUBP1P53384 320 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 KIF23Q02241 960 aaPredicted RBP4.68□□□□□ -1.66
PTPRC-213ENST00000529828 NOGQ13253 232 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 TAF7Q15545 349 aaPredicted RBP4.68□□□□□ -1.66
PTPRC-213ENST00000529828 CDC37L1Q7L3B6 337 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 CFAP53Q96M91 514 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 CNOT7Q9UIV1 285 aaKnown RBP4.68□□□□□ -1.66
PTPRC-213ENST00000529828 ASTN2O75129 1339 aaPredicted RBP4.68□□□□□ -1.66
PTPRC-213ENST00000529828 FAM155AB1AL88 458 aaPredicted RBP4.68□□□□□ -1.66
PTPRC-213ENST00000529828 RIMBP2O15034 1052 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 RGL2O15211 777 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 ZNF157P51786 506 aaPredicted RBP4.68□□□□□ -1.66
PTPRC-213ENST00000529828 RGMBQ6NW40 437 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 KRT26Q7Z3Y9 468 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 ZNF34Q8IZ26 560 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 MPNDQ8N594 471 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 NECTIN2Q92692 538 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 NLRP3Q96P20 1036 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 DBNDD1Q9H9R9 158 aa4.68□□□□□ -1.66
PTPRC-213ENST00000529828 NUP98P52948 1817 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 IBTKQ9P2D0 1353 aaPredicted RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 POTEB3A0JP26 581 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 H7C1D1 291 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 PSMD14O00487 310 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 EIF2S2P20042 333 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 EIF4A1P60842 406 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 GOLGA2Q08379 1002 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 KIAA2012Q0VF49 1180 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 TNIP1Q15025 636 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 PROSER3Q2NL68 480 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 POTEBQ6S5H4 581 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 GIGYF2Q6Y7W6 1299 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 PPP1R42Q7Z4L9 355 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 SUPT20HQ8NEM7 779 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 CCER1Q8TC90 406 aaPredicted RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 HHIPL1Q96JK4 782 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 UTP14AQ9BVJ6 771 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 RTFDC1Q9BY42 306 aaPredicted RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 GBA2Q9HCG7 927 aaPredicted RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 KCNQ5Q9NR82 932 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 RNF186Q9NXI6 227 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 PGAP2Q9UHJ9 254 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 NUDCQ9Y266 331 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 DUOX1Q9NRD9 1551 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 CLSPNQ9HAW4 1339 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 AIMP1Q12904 312 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 DOK7Q18PE1 504 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 GRIPAP1Q4V328 841 aa4.67□□□□□ -1.66
PTPRC-213ENST00000529828 PRPF38BQ5VTL8 546 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 ZC3H15Q8WU90 426 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 SCAF8Q9UPN6 1271 aaKnown RBP4.67□□□□□ -1.66
PTPRC-213ENST00000529828 CDHR2Q9BYE9 1310 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 PPP2R1AP30153 589 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 MKRN3Q13064 507 aaKnown RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 GRAPQ13588 217 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 PARP10Q53GL7 1025 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 DDX46Q7L014 1031 aaKnown RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 SP8Q8IXZ3 490 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 C2orf69Q8N8R5 385 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 GRAPLQ8TC17 118 aaPredicted RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 CSRNP1Q96S65 589 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 GGA3Q9NZ52 723 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 HPS5Q9UPZ3 1129 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 KDM3BQ7LBC6 1761 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 COL4A1P02462 1669 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 RTL9Q8NET4 1388 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 C6orf229H3BNL8 230 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 HTATSF1O43719 755 aaKnown RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 SLC10A3P09131 477 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 PDIA6Q15084 440 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 RTL5Q5HYW3 569 aaPredicted RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 MOB2Q70IA6 237 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 CTU1Q7Z7A3 348 aaKnown RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 NLRP10Q86W26 655 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 DCPSQ96C86 337 aaKnown RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 CDCA5Q96FF9 252 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 SAGE1Q9NXZ1 904 aa4.66□□□□□ -1.66
PTPRC-213ENST00000529828 TRMT112Q9UI30 125 aaKnown RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 NSFL1CQ9UNZ2 370 aaKnown RBP4.66□□□□□ -1.66
PTPRC-213ENST00000529828 RANBP2P49792 3224 aaKnown RBP4.65□□□□□ -1.66
PTPRC-213ENST00000529828 G3V3G9 751 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 ECE2O60344 883 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 BBOX1O75936 387 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 TBC1D8O95759 1140 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 GPSM2P81274 684 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 WASHC4Q2M389 1173 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 KIF4BQ2VIQ3 1234 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 SLC10A5Q5PT55 438 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 DCAF8Q5TAQ9 597 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 LRP10Q7Z4F1 713 aa4.65□□□□□ -1.66
PTPRC-213ENST00000529828 RASAL3Q86YV0 1011 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms