RNA–Protein interactions for RNA: ENST00000528400.1

FNTA-207, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 2

Gene FNTA, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-207ENST00000528400 TTC9Q92623 222 aa6.93□□□□□ -1.3
FNTA-207ENST00000528400 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
FNTA-207ENST00000528400 GSX2Q9BZM3 304 aa6.93□□□□□ -1.3
FNTA-207ENST00000528400 FHAD1B1AJZ9 1412 aa6.93□□□□□ -1.3
FNTA-207ENST00000528400 IGLV1-40P01703 118 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 SKIP12755 728 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 CPB1P15086 417 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 POTEAQ6S8J7 498 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 AEBP1Q8IUX7 1158 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 ZNF280CQ8ND82 737 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 LPIN3Q9BQK8 851 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 VRTNQ9H8Y1 702 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 SRA1Q9HD15 236 aaKnown RBP6.92□□□□□ -1.3
FNTA-207ENST00000528400 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 HCN4Q9Y3Q4 1203 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 WRNQ14191 1432 aaPredicted RBP eCLIP6.92□□□□□ -1.3
FNTA-207ENST00000528400 ABCC10Q5T3U5 1492 aa6.92□□□□□ -1.3
FNTA-207ENST00000528400 ERICH3Q5RHP9 1530 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 ERCC6L2Q5T890 1561 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 USP17L3A6NCW0 530 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 USP17L4A6NCW7 530 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 USP17L5A8MUK1 530 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 DLL1O00548 723 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 EPB42P16452 691 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 NFKB1P19838 968 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 USP17L2Q6R6M4 530 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 USP17L1Q7RTZ2 530 aa6.91□□□□□ -1.3
FNTA-207ENST00000528400 KDM6BO15054 1643 aa6.9□□□□□ -1.3
FNTA-207ENST00000528400 TMEM88BA6NKF7 163 aa6.9□□□□□ -1.3
FNTA-207ENST00000528400 TGFB1P01137 390 aa6.9□□□□□ -1.3
FNTA-207ENST00000528400 ARID4AP29374 1257 aaPredicted RBP6.9□□□□□ -1.3
FNTA-207ENST00000528400 ELOAQ14241 798 aaKnown RBP6.9□□□□□ -1.3
FNTA-207ENST00000528400 GRIK5Q16478 980 aa6.9□□□□□ -1.3
FNTA-207ENST00000528400 TRIM50Q86XT4 487 aa6.9□□□□□ -1.3
FNTA-207ENST00000528400 STOML1Q9UBI4 398 aa6.9□□□□□ -1.3
FNTA-207ENST00000528400 DIP2BQ9P265 1576 aa6.9□□□□□ -1.31
FNTA-207ENST00000528400 F8W735 103 aaPredicted RBP6.89□□□□□ -1.31
FNTA-207ENST00000528400 MAP3K6O95382 1288 aa6.89□□□□□ -1.31
FNTA-207ENST00000528400 PERM1Q5SV97 790 aa6.89□□□□□ -1.31
FNTA-207ENST00000528400 IER5Q5VY09 327 aa6.89□□□□□ -1.31
FNTA-207ENST00000528400 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
FNTA-207ENST00000528400 DEAF1O75398 565 aaPredicted RBP6.88□□□□□ -1.31
FNTA-207ENST00000528400 MED26O95402 600 aa6.88□□□□□ -1.31
FNTA-207ENST00000528400 BRD1O95696 1058 aa6.88□□□□□ -1.31
FNTA-207ENST00000528400 JAG1P78504 1218 aa6.88□□□□□ -1.31
FNTA-207ENST00000528400 MAP4K3Q8IVH8 894 aa6.88□□□□□ -1.31
FNTA-207ENST00000528400 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
FNTA-207ENST00000528400 TRPM4Q8TD43 1214 aa6.88□□□□□ -1.31
FNTA-207ENST00000528400 TSPAN10Q9H1Z9 355 aaPredicted RBP6.88□□□□□ -1.31
FNTA-207ENST00000528400 RUSC2Q8N2Y8 1516 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 PRG4Q92954 1404 aaPredicted RBP6.87□□□□□ -1.31
FNTA-207ENST00000528400 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 DHX15O43143 795 aaKnown RBP6.87□□□□□ -1.31
FNTA-207ENST00000528400 WNT11O96014 354 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 SPINK2P20155 84 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 ATP1A2P50993 1020 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 NCOA4Q13772 614 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 Q6ZS46 218 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 ALDH16A1Q8IZ83 802 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 MKRN1Q9UHC7 482 aaKnown RBP6.87□□□□□ -1.31
FNTA-207ENST00000528400 ZMIZ1Q9ULJ6 1067 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 BIVM-ERCC5R4GMW8 1640 aa6.87□□□□□ -1.31
FNTA-207ENST00000528400 PATL2C9JE40 543 aaKnown RBP6.86□□□□□ -1.31
FNTA-207ENST00000528400 M0R2N6 131 aa6.86□□□□□ -1.31
FNTA-207ENST00000528400 ALX3O95076 343 aa6.86□□□□□ -1.31
FNTA-207ENST00000528400 GLB1P16278 677 aa6.86□□□□□ -1.31
FNTA-207ENST00000528400 KCNA1Q09470 495 aa6.86□□□□□ -1.31
FNTA-207ENST00000528400 DHX32Q7L7V1 743 aaKnown RBP6.86□□□□□ -1.31
FNTA-207ENST00000528400 C11orf16Q9NQ32 467 aa6.86□□□□□ -1.31
FNTA-207ENST00000528400 TOP2BQ02880 1626 aa6.86□□□□□ -1.31
FNTA-207ENST00000528400 USP17L15C9J2P7 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L10C9JJH3 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L13C9JLJ4 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L12C9JPN9 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L11C9JVI0 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L21D6R901 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L18D6R9N7 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L22D6RA61 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L17D6RBQ6 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L19D6RCP7 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L20D6RJB6 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 PPP1R12BO60237 982 aaPredicted RBP6.85□□□□□ -1.31
FNTA-207ENST00000528400 GPLD1P80108 840 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 FAM69CQ0P6D2 419 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 USP17L24Q0WX57 530 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 PTK7Q13308 1070 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 DTX1Q86Y01 620 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 ZDHHC13Q8IUH4 622 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 TPCN2Q8NHX9 752 aa6.85□□□□□ -1.31
FNTA-207ENST00000528400 NOVA2Q9UNW9 492 aaKnown RBP6.85□□□□□ -1.31
FNTA-207ENST00000528400 NFIAQ12857 509 aa6.84□□□□□ -1.31
FNTA-207ENST00000528400 CRTC2Q53ET0 693 aaPredicted RBP6.84□□□□□ -1.31
FNTA-207ENST00000528400 TMEM164Q5U3C3 297 aa6.84□□□□□ -1.31
FNTA-207ENST00000528400 STK32AQ8WU08 396 aa6.84□□□□□ -1.31
FNTA-207ENST00000528400 CEP41Q9BYV8 373 aa6.84□□□□□ -1.31
FNTA-207ENST00000528400 SMG9Q9H0W8 520 aaKnown RBP6.84□□□□□ -1.31
FNTA-207ENST00000528400 CCDC9Q9Y3X0 531 aaKnown RBP6.84□□□□□ -1.31
FNTA-207ENST00000528400 ADCY10Q96PN6 1610 aa6.83□□□□□ -1.32
FNTA-207ENST00000528400 TGFBR3LH3BV60 316 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms