RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 ARAP1Q96P48 1450 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 FSD2A1L4K1 749 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 TBX3O15119 743 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 RGS20O76081 388 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 CCNCP24863 283 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 KIF5BP33176 963 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 GTF2F1P35269 517 aaKnown RBP eCLIP7.63□□□□□ -1.19
SDC2-208ENST00000523877 GJA8P48165 433 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 COX10Q12887 443 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 WTAPQ15007 396 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 BRD3Q15059 726 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 AGAP9Q5VTM2 703 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 PDXDC1Q6P996 788 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 MYLK4Q86YV6 388 aaPredicted RBP7.63□□□□□ -1.19
SDC2-208ENST00000523877 LRRC49Q8IUZ0 686 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 SUGP1Q8IWZ8 645 aaKnown RBP7.63□□□□□ -1.19
SDC2-208ENST00000523877 CCDC65Q8IXS2 484 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 STAG1Q8WVM7 1258 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 JARID2Q92833 1246 aaPredicted RBP7.63□□□□□ -1.19
SDC2-208ENST00000523877 RPGRQ92834 1020 aaKnown RBP7.63□□□□□ -1.19
SDC2-208ENST00000523877 TBC1D31Q96DN5 1066 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 SH3GL3Q99963 347 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 ZSWIM4Q9H7M6 989 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 CLIC5Q9NZA1 410 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 GJA3Q9Y6H8 435 aa7.63□□□□□ -1.19
SDC2-208ENST00000523877 GRXCR2A6NFK2 248 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 BOLA2-SMG1P6H3BVE0 249 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 SLC27A2O14975 620 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 ATP2B1P20020 1258 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 IL4RP24394 825 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 PDE6BP35913 854 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 PSEN2P49810 448 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 NUCB2P80303 420 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 SLC7A5Q01650 507 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 MECOMQ03112 1051 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 SFSWAPQ12872 951 aaKnown RBP7.62□□□□□ -1.19
SDC2-208ENST00000523877 CCDC152Q4G0S7 254 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 FAAH2Q6GMR7 532 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 CCDC80Q76M96 950 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 C11orf74Q86VG3 221 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 CCDC144CPQ8IYA2 1237 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 UHMK1Q8TAS1 419 aaKnown RBP7.62□□□□□ -1.19
SDC2-208ENST00000523877 TATDN2Q93075 761 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 ZNF496Q96IT1 587 aaPredicted RBP7.62□□□□□ -1.19
SDC2-208ENST00000523877 PAWRQ96IZ0 340 aaKnown RBP7.62□□□□□ -1.19
SDC2-208ENST00000523877 CRACR2AQ9BSW2 395 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 NACA2Q9H009 215 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 UPF2Q9HAU5 1272 aaKnown RBP7.62□□□□□ -1.19
SDC2-208ENST00000523877 MKS1Q9NXB0 559 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 HCSTQ9UBK5 93 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 COG6Q9Y2V7 657 aa7.62□□□□□ -1.19
SDC2-208ENST00000523877 AKNAQ7Z591 1439 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 KAT6BQ8WYB5 2073 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 IQCA1LA6NCM1 817 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 HRO43593 1189 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 MYO1BO43795 1136 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 DNAJC6O75061 913 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 RECKO95980 971 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 HOXA10P31260 410 aaPredicted RBP7.61□□□□□ -1.19
SDC2-208ENST00000523877 TSPAN7P41732 249 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 FOXK1P85037 733 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 DSG2Q14126 1118 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 EIF4A2Q14240 407 aaKnown RBP7.61□□□□□ -1.19
SDC2-208ENST00000523877 RBBP5Q15291 538 aaKnown RBP7.61□□□□□ -1.19
SDC2-208ENST00000523877 NACC2Q96BF6 587 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 BICD1Q96G01 975 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 FEZ1Q99689 392 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 KMT5AQ9NQR1 393 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.61□□□□□ -1.19
SDC2-208ENST00000523877 DKK3Q9UBP4 350 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 SEL1LQ9UBV2 794 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 PRKAG2Q9UGJ0 569 aa7.61□□□□□ -1.19
SDC2-208ENST00000523877 EVLQ9UI08 416 aaPredicted RBP7.61□□□□□ -1.19
SDC2-208ENST00000523877 FBXO2Q9UK22 296 aaPredicted RBP7.61□□□□□ -1.19
SDC2-208ENST00000523877 MORC2Q9Y6X9 1032 aaPredicted RBP7.61□□□□□ -1.19
SDC2-208ENST00000523877 PHLDB1Q86UU1 1377 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 ERLIN1O75477 346 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 MYBL2P10244 700 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 ITGAEP38570 1179 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 ICA1Q05084 483 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 SIM2Q14190 667 aaPredicted RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 NFKBIBQ15653 356 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 KIF4BQ2VIQ3 1234 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 PREPLQ4J6C6 727 aaPredicted RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 FAM133BQ5BKY9 247 aaKnown RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 ARMC3Q5W041 872 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 ZCCHC8Q6NZY4 707 aaKnown RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 HDGFL2Q7Z4V5 671 aaPredicted RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 DRAXINQ8NBI3 349 aaPredicted RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 ZNF280CQ8ND82 737 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 FAM76AQ8TAV0 307 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 USP33Q8TEY7 942 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 SH3TC2Q8TF17 1288 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 PTCD2Q8WV60 388 aaKnown RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 USP6NLQ92738 828 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 DDX12PQ92771 950 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 APBA2Q99767 749 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 SLC39A3Q9BRY0 314 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 SEPT10Q9P0V9 454 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 CFAP45Q9UL16 551 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms