RNA–Protein interactions for RNA: ENST00000523770.1

TMPRSS4-215, Transcript of transmembrane serine protease 4, human

TSL 3

Gene TMPRSS4, Length 480 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPRSS4-215	ENST00000523770	NSFL1C	Q9UNZ2	370 aa	Known RBP	14.05	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	PITPNM2	Q9BZ72	1349 aa		14.05	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	C6orf229	H3BNL8	230 aa		14.04	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	MNX1	P50219	401 aa	Predicted RBP	14.04	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	TTLL12	Q14166	644 aa	Predicted RBP	14.04	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	TMEM106C	Q9BVX2	250 aa		14.04	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	VCAN	P13611	3396 aa		14.04	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	POLR2A	P24928	1970 aa	Known RBP	14.03	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	PTPN12	Q05209	780 aa	Known RBP	14.03	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	TAF7	Q15545	349 aa	Predicted RBP	14.03	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	ZNF333	Q96JL9	665 aa		14.03	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	RSPH6A	Q9H0K4	717 aa		14.03	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	MYOZ2	Q9NPC6	264 aa		14.03	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	RBBP6	Q7Z6E9	1792 aa	Known RBP	14.03	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	NUP98	P52948	1817 aa		14.02	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	ZNF609	O15014	1411 aa		14.02	□□□□□ -0.16
TMPRSS4-215	ENST00000523770	GPSM2	P81274	684 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	TCIRG1	Q13488	830 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	SPRYD7	Q5W111	196 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	IFNL1	Q8IU54	200 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	AGBL3	Q8NEM8	1001 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	CD99L2	Q8TCZ2	262 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	ERO1A	Q96HE7	468 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	EYA3	Q99504	573 aa		14.02	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	CAP1	Q01518	475 aa		14.01	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	RSBN1L	Q6PCB5	846 aa	Predicted RBP	14.01	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	NECTIN2	Q92692	538 aa		14.01	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	EFCC1	Q9HA90	598 aa		14.01	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	SPTBN5	Q9NRC6	3674 aa	Known RBP	14.01	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	HSPA5	P11021	654 aa	Known RBP	14	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	LRP10	Q7Z4F1	713 aa		14	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	NLRP10	Q86W26	655 aa		14	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	TBC1D16	Q8TBP0	767 aa		14	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	CELF1	Q92879	486 aa	Known RBP	14	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	GML	Q99445	158 aa		14	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	PRO3102	Q9H379	93 aa		14	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	LRRC37A	A6NMS7	1700 aa		13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	MANSC4	A6NHS7	340 aa	Predicted RBP	13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	USP17L8	P0C7I0	530 aa		13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	NF2	P35240	595 aa		13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	INHBE	P58166	350 aa		13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	EIF4A1	P60842	406 aa	Known RBP	13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	NBPF9	Q3BBW0	867 aa		13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	CC2D1B	Q5T0F9	858 aa	Known RBP	13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	LDLRAD1	Q5T700	205 aa		13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	TRMT112	Q9UI30	125 aa	Known RBP	13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	LAMB4	A4D0S4	1761 aa		13.99	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	SH3TC1	Q8TE82	1336 aa		13.98	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	HTATSF1	O43719	755 aa	Known RBP	13.98	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	PRKG1	Q13976	671 aa		13.98	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	SLC4A8	Q2Y0W8	1093 aa		13.98	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	THUMPD2	Q9BTF0	503 aa	Known RBP	13.98	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.98	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	ERBB4	Q15303	1308 aa		13.97	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	CRHR2	Q13324	411 aa		13.97	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	SLC9C1	Q4G0N8	1177 aa		13.97	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	ARMC9	Q7Z3E5	817 aa		13.97	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	SP3	Q02447	781 aa		13.96	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	PDIA6	Q15084	440 aa		13.96	□□□□□ -0.17
TMPRSS4-215	ENST00000523770	NBPF11	Q86T75	865 aa		13.96	□□□□□ -0.17
TMPRSS4-215	ENST00000523770		G3V3G9	751 aa		13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	SOX1	O00570	391 aa	Predicted RBP	13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	PER1	O15534	1290 aa	Predicted RBP	13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	MYC	P01106	439 aa	Predicted RBP	13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	ZBTB48	P10074	688 aa	Predicted RBP	13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	DCAF8	Q5TAQ9	597 aa		13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	PNISR	Q8TF01	805 aa	Known RBP	13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	DPF3	Q92784	378 aa		13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	PODXL2	Q9NZ53	605 aa		13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	FZD1	Q9UP38	647 aa		13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	PTCH2	Q9Y6C5	1203 aa		13.95	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	ANKRD36C	Q5JPF3	1778 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	WTIP	A6NIX2	430 aa	Predicted RBP	13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	WNT10B	O00744	389 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	SF3B3	Q15393	1217 aa	Known RBP	13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	PROSER3	Q2NL68	480 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	HSP90AB3P	Q58FF7	597 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	ZNF428	Q96B54	188 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	SLC10A4	Q96EP9	437 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	ANGEL1	Q9UNK9	670 aa	Known RBP	13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	SCN9A	Q15858	1988 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	COL4A1	P02462	1669 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	LAMB2	P55268	1798 aa		13.94	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	UFL1	O94874	794 aa		13.93	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	ANXA1	P04083	346 aa		13.93	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	LRCH3	Q96II8	777 aa		13.93	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	WNK4	Q96J92	1243 aa		13.93	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	DDX60	Q8IY21	1712 aa	Known RBP	13.93	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	USP17L3	A6NCW0	530 aa		13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	USP17L4	A6NCW7	530 aa		13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	RPS8	P62241	208 aa	Known RBP	13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	USP17L1	Q7RTZ2	530 aa		13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	SHISA4	Q96DD7	197 aa		13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	CLMN	Q96JQ2	1002 aa		13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	PTPN18	Q99952	460 aa		13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.92	□□□□□ -0.18
TMPRSS4-215	ENST00000523770	TIMELESS	Q9UNS1	1208 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms