RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	ZNF511	Q8NB15	262 aa		7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	LAMA2	P24043	3122 aa	Known RBP	7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	CACNA1A	O00555	2505 aa		7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	RPGRIP1L	Q68CZ1	1315 aa		7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	SLIT3	O75094	1523 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	SEMA3F	Q13275	785 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	NGDN	Q8NEJ9	315 aa	Known RBP	7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	ADAMTS19	Q8TE59	1207 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	BAP1	Q92560	729 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	PRAM1	Q96QH2	718 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	OCSTAMP	Q9BR26	566 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	ARHGAP9	Q9BRR9	750 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	PIK3C2G	O75747	1445 aa		7.49	□□□□□ -1.21
PABPC1-223	ENST00000523636	GLTPD2	A6NH11	291 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	PDIA4	P13667	645 aa	Known RBP	7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	WNT7B	P56706	349 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	TRIM32	Q13049	653 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	PLA2G2C	Q5R387	149 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	PPIP5K1	Q6PFW1	1433 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	SLC17A8	Q8NDX2	589 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	PRUNE2	Q8WUY3	3088 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	GCC1	Q96CN9	775 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	CARD10	Q9BWT7	1032 aa		7.48	□□□□□ -1.21
PABPC1-223	ENST00000523636	RASSF10	A6NK89	507 aa		7.47	□□□□□ -1.21
PABPC1-223	ENST00000523636	DPEP1	P16444	411 aa		7.47	□□□□□ -1.21
PABPC1-223	ENST00000523636	ADAM32	Q8TC27	787 aa		7.47	□□□□□ -1.21
PABPC1-223	ENST00000523636	DCAF5	Q96JK2	942 aa		7.47	□□□□□ -1.21
PABPC1-223	ENST00000523636	WDR33	Q9C0J8	1336 aa	Known RBP	7.47	□□□□□ -1.21
PABPC1-223	ENST00000523636	C4B	P0C0L5	1744 aa		7.47	□□□□□ -1.21
PABPC1-223	ENST00000523636	RGS20	O76081	388 aa		7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	CD2BP2	O95400	341 aa	Known RBP	7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	SH3BP2	P78314	561 aa		7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	MAP2K1	Q02750	393 aa	Predicted RBP	7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	RASSF7	Q02833	373 aa		7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	DGKZ	Q13574	1117 aa		7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	ZBTB33	Q86T24	672 aa		7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	POLR3A	O14802	1390 aa	Predicted RBP	7.46	□□□□□ -1.22
PABPC1-223	ENST00000523636	TGFB2	P61812	414 aa		7.45	□□□□□ -1.22
PABPC1-223	ENST00000523636	LINC01559	Q495D7	138 aa		7.45	□□□□□ -1.22
PABPC1-223	ENST00000523636	FOXJ1	Q92949	421 aa		7.45	□□□□□ -1.22
PABPC1-223	ENST00000523636	PUS7	Q96PZ0	661 aa	Known RBP	7.45	□□□□□ -1.22
PABPC1-223	ENST00000523636	C1QTNF2	Q9BXJ5	285 aa		7.45	□□□□□ -1.22
PABPC1-223	ENST00000523636	CCNL1	Q9UK58	526 aa	Predicted RBP	7.45	□□□□□ -1.22
PABPC1-223	ENST00000523636	ADAMTSL1	Q8N6G6	1762 aa		7.45	□□□□□ -1.22
PABPC1-223	ENST00000523636	TMEM88B	A6NKF7	163 aa		7.44	□□□□□ -1.22
PABPC1-223	ENST00000523636	AGER	Q15109	404 aa		7.44	□□□□□ -1.22
PABPC1-223	ENST00000523636	TRMT44	Q8IYL2	757 aa	Known RBP	7.44	□□□□□ -1.22
PABPC1-223	ENST00000523636	ABTB2	Q8N961	1025 aa		7.44	□□□□□ -1.22
PABPC1-223	ENST00000523636	NFATC2IP	Q8NCF5	419 aa		7.44	□□□□□ -1.22
PABPC1-223	ENST00000523636	CDV3	Q9UKY7	258 aa	Known RBP	7.44	□□□□□ -1.22
PABPC1-223	ENST00000523636	DICER1	Q9UPY3	1922 aa	Known RBP	7.44	□□□□□ -1.22
PABPC1-223	ENST00000523636	MAGEB6P1	A0A0J9YX57	407 aa		7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	WASL	O00401	505 aa	Predicted RBP	7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	VARS	P26640	1264 aa	Known RBP	7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	ERFE	Q4G0M1	354 aa		7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	C4orf48	Q5BLP8	95 aa		7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	DZIP3	Q86Y13	1208 aa	Known RBP	7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	PPP1R12C	Q9BZL4	782 aa		7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	CEP126	Q9P2H0	1117 aa		7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	PCDHB9	Q9Y5E1	797 aa		7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	CPSF1	Q10570	1443 aa	Known RBP	7.43	□□□□□ -1.22
PABPC1-223	ENST00000523636	SKOR1	P84550	965 aa		7.42	□□□□□ -1.22
PABPC1-223	ENST00000523636	DEFB115	Q30KQ5	88 aa		7.42	□□□□□ -1.22
PABPC1-223	ENST00000523636	LIAT1	Q6ZQX7	453 aa		7.42	□□□□□ -1.22
PABPC1-223	ENST00000523636	UCN2	Q96RP3	112 aa		7.42	□□□□□ -1.22
PABPC1-223	ENST00000523636	CARD14	Q9BXL6	1004 aa		7.42	□□□□□ -1.22
PABPC1-223	ENST00000523636	ACE	P12821	1306 aa		7.42	□□□□□ -1.22
PABPC1-223	ENST00000523636	CCDC7	Q96M83	1385 aa		7.42	□□□□□ -1.22
PABPC1-223	ENST00000523636	C4A	P0C0L4	1744 aa		7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	MAP2	P11137	1827 aa	Known RBP	7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	MMP10	P09238	476 aa		7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	SLC19A1	P41440	591 aa		7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	FAM174A	Q8TBP5	190 aa		7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	EMID1	Q96A84	441 aa	Predicted RBP	7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	SLC10A4	Q96EP9	437 aa		7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	ANKRD36B	Q8N2N9	1353 aa		7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	TTC28	Q96AY4	2481 aa		7.41	□□□□□ -1.22
PABPC1-223	ENST00000523636	PALM3	A6NDB9	673 aa	Predicted RBP	7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	ATP9B	O43861	1147 aa		7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	NBPF20	Q3BBV1	942 aa		7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	ARHGEF25	Q86VW2	580 aa		7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	PHTF2	Q8N3S3	785 aa		7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	FLAD1	Q8NFF5	587 aa		7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	MAP4K5	Q9Y4K4	846 aa		7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	ADGRB1	O14514	1584 aa		7.4	□□□□□ -1.22
PABPC1-223	ENST00000523636	NSD3	Q9BZ95	1437 aa		7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	SLFNL1	Q499Z3	407 aa		7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	CFAP70	Q5T0N1	1121 aa		7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	RC3H1	Q5TC82	1133 aa	Known RBP	7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	RNF20	Q5VTR2	975 aa		7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	KCTD17	Q8N5Z5	321 aa		7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	EHBP1	Q8NDI1	1231 aa		7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	NUDT16	Q96DE0	195 aa	Known RBP	7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	C14orf93	Q9H972	538 aa	Known RBP	7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	TFIP11	Q9UBB9	837 aa	Known RBP	7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636		V9GY48	417 aa	Predicted RBP	7.39	□□□□□ -1.23
PABPC1-223	ENST00000523636	EIF3A	Q14152	1382 aa	Known RBP	7.38	□□□□□ -1.23
PABPC1-223	ENST00000523636	WNT7A	O00755	349 aa		7.38	□□□□□ -1.23
PABPC1-223	ENST00000523636	LZTS3	O60299	673 aa	Predicted RBP	7.38	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms