RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 NFIAQ12857 509 aa6.64□□□□□ -1.35
PCM1-217ENST00000522998 PTK7Q13308 1070 aa6.64□□□□□ -1.35
PCM1-217ENST00000522998 CRTC2Q53ET0 693 aaPredicted RBP6.64□□□□□ -1.35
PCM1-217ENST00000522998 ARMC10Q8N2F6 343 aa6.64□□□□□ -1.35
PCM1-217ENST00000522998 MYO19Q96H55 970 aa6.64□□□□□ -1.35
PCM1-217ENST00000522998 PPME1Q9Y570 386 aa6.64□□□□□ -1.35
PCM1-217ENST00000522998 FOXO3O43524 673 aa6.63□□□□□ -1.35
PCM1-217ENST00000522998 ADAMTS4O75173 837 aa6.63□□□□□ -1.35
PCM1-217ENST00000522998 FZD5Q13467 585 aa6.63□□□□□ -1.35
PCM1-217ENST00000522998 ACAD11Q709F0 780 aa6.63□□□□□ -1.35
PCM1-217ENST00000522998 UTP4Q969X6 686 aaKnown RBP6.63□□□□□ -1.35
PCM1-217ENST00000522998 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
PCM1-217ENST00000522998 WISP1O95388 367 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 UVSSAQ2YD98 709 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 TPRNQ4KMQ1 711 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 RNF43Q68DV7 783 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 TREML1Q86YW5 311 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 ANKMY2Q8IV38 441 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 GALNT11Q8NCW6 608 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 DBNDD2Q9BQY9 259 aa6.62□□□□□ -1.35
PCM1-217ENST00000522998 USP17L15C9J2P7 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L10C9JJH3 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L13C9JLJ4 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L12C9JPN9 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L11C9JVI0 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L21D6R901 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L18D6R9N7 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L22D6RA61 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L17D6RBQ6 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L19D6RCP7 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L20D6RJB6 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 LINC01387J3KSC0 135 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 WNT11O96014 354 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 WEE1P30291 646 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
PCM1-217ENST00000522998 USP17L24Q0WX57 530 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 DTX1Q86Y01 620 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.61□□□□□ -1.355e-9■■■■■ 51.3
PCM1-217ENST00000522998 KCNMB2Q9Y691 235 aa6.61□□□□□ -1.35
PCM1-217ENST00000522998 HMX2A2RU54 273 aa6.6□□□□□ -1.35
PCM1-217ENST00000522998 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
PCM1-217ENST00000522998 FLIIQ13045 1269 aa6.6□□□□□ -1.35
PCM1-217ENST00000522998 GLMNQ92990 594 aa6.6□□□□□ -1.35
PCM1-217ENST00000522998 FAM46AQ96IP4 442 aaKnown RBP6.6□□□□□ -1.35
PCM1-217ENST00000522998 LRFN2Q9ULH4 789 aa6.6□□□□□ -1.35
PCM1-217ENST00000522998 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
PCM1-217ENST00000522998 KANK4Q5T7N3 995 aaPredicted RBP6.59□□□□□ -1.35
PCM1-217ENST00000522998 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
PCM1-217ENST00000522998 NLRP13Q86W25 1043 aa6.59□□□□□ -1.35
PCM1-217ENST00000522998 MYRFLQ96LU7 910 aa6.59□□□□□ -1.35
PCM1-217ENST00000522998 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
PCM1-217ENST00000522998 KIAA1211Q6ZU35 1233 aa6.58□□□□□ -1.36
PCM1-217ENST00000522998 LACRTQ9GZZ8 138 aa6.58□□□□□ -1.36
PCM1-217ENST00000522998 SMNDC1O75940 238 aaKnown RBP eCLIP6.57□□□□□ -1.36
PCM1-217ENST00000522998 CDC27P30260 824 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 DUOXA2Q1HG44 320 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 CEP135Q66GS9 1140 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 CLEC10AQ8IUN9 316 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 SPACA7Q96KW9 195 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 CARD10Q9BWT7 1032 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 ADGRE2Q9UHX3 823 aa6.57□□□□□ -1.36
PCM1-217ENST00000522998 CDC25BP30305 580 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 ATP11AP98196 1134 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 HYAL2Q12891 473 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 TRIP4Q15650 581 aaPredicted RBP6.56□□□□□ -1.36
PCM1-217ENST00000522998 FAM117BQ6P1L5 589 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 FAM20CQ8IXL6 584 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 KLHL23Q8NBE8 558 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 OR13H1Q8NG92 308 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 ARXQ96QS3 562 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 FAM83CQ9BQN1 747 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 PPP1R12CQ9BZL4 782 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 VRTNQ9H8Y1 702 aa6.56□□□□□ -1.36
PCM1-217ENST00000522998 FSCN2O14926 492 aa6.55□□□□□ -1.36
PCM1-217ENST00000522998 SART1O43290 800 aaKnown RBP6.55□□□□□ -1.36
PCM1-217ENST00000522998 COX20Q5RI15 118 aa6.55□□□□□ -1.36
PCM1-217ENST00000522998 COL13A1Q5TAT6 717 aaPredicted RBP6.55□□□□□ -1.36
PCM1-217ENST00000522998 BEND4Q6ZU67 534 aa6.55□□□□□ -1.36
PCM1-217ENST00000522998 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
PCM1-217ENST00000522998 UBAP1LF5GYI3 381 aa6.54□□□□□ -1.36
PCM1-217ENST00000522998 TM4SF5O14894 197 aa6.54□□□□□ -1.36
PCM1-217ENST00000522998 BMP3P12645 472 aa6.54□□□□□ -1.36
PCM1-217ENST00000522998 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
PCM1-217ENST00000522998 FOXD4L4Q8WXT5 416 aaPredicted RBP6.54□□□□□ -1.36
PCM1-217ENST00000522998 FAM177BA6PVY3 158 aa6.53□□□□□ -1.36
PCM1-217ENST00000522998 DDX3YO15523 660 aaKnown RBP6.53□□□□□ -1.36
PCM1-217ENST00000522998 SCNN1AP37088 669 aa6.53□□□□□ -1.36
PCM1-217ENST00000522998 ANKRD34AQ69YU3 496 aa6.53□□□□□ -1.36
PCM1-217ENST00000522998 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.53□□□□□ -1.36
PCM1-217ENST00000522998 ETFBKMTQ8IXQ9 262 aa6.53□□□□□ -1.36
PCM1-217ENST00000522998 RASSF4Q9H2L5 321 aa6.53□□□□□ -1.36
PCM1-217ENST00000522998 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
PCM1-217ENST00000522998 ADAM11O75078 769 aa6.52□□□□□ -1.37
PCM1-217ENST00000522998 EPHA1P21709 976 aa6.52□□□□□ -1.37
PCM1-217ENST00000522998 BRD2P25440 801 aaKnown RBP6.52□□□□□ -1.37
PCM1-217ENST00000522998 LMOD1P29536 600 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms