RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 REC8O95072 547 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 GUCY2CP25092 1073 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 POU4F2Q12837 409 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.42□□□□□ -0.74
SHPRH-208ENST00000520752 MUM1L1Q5H9M0 696 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 AEBP1Q8IUX7 1158 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 KRT222Q8N1A0 295 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-208ENST00000520752 L3MBTL2Q969R5 705 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 RASSF4Q9H2L5 321 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 BSDC1Q9NW68 430 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-208ENST00000520752 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-208ENST00000520752 PTCD1O75127 700 aaKnown RBP10.41□□□□□ -0.74
SHPRH-208ENST00000520752 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
SHPRH-208ENST00000520752 UVSSAQ2YD98 709 aa10.41□□□□□ -0.74
SHPRH-208ENST00000520752 NLRP13Q86W25 1043 aa10.41□□□□□ -0.74
SHPRH-208ENST00000520752 GOLGA6L1Q8N7Z2 621 aa10.41□□□□□ -0.74
SHPRH-208ENST00000520752 TRIM47Q96LD4 638 aa10.41□□□□□ -0.74
SHPRH-208ENST00000520752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.74
SHPRH-208ENST00000520752 KIF16BQ96L93 1317 aa10.4□□□□□ -0.74
SHPRH-208ENST00000520752 MAN1A2O60476 641 aa10.4□□□□□ -0.74
SHPRH-208ENST00000520752 NOLC1Q14978 699 aaKnown RBP eCLIP10.4□□□□□ -0.74
SHPRH-208ENST00000520752 TXNDC2Q86VQ3 553 aa10.4□□□□□ -0.74
SHPRH-208ENST00000520752 NGEFQ8N5V2 710 aa10.4□□□□□ -0.74
SHPRH-208ENST00000520752 DONSONQ9NYP3 566 aa10.4□□□□□ -0.74
SHPRH-208ENST00000520752 CTNNA3Q9UI47 895 aa10.4□□□□□ -0.74
SHPRH-208ENST00000520752 GNEQ9Y223 722 aaKnown RBP10.4□□□□□ -0.74
SHPRH-208ENST00000520752 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
SHPRH-208ENST00000520752 PMFBP1Q8TBY8 1022 aa10.39□□□□□ -0.75
SHPRH-208ENST00000520752 FAM53CQ9NYF3 392 aa10.39□□□□□ -0.75
SHPRH-208ENST00000520752 GMPR2Q9P2T1 348 aaKnown RBP10.39□□□□□ -0.75
SHPRH-208ENST00000520752 MTUS2Q5JR59 1369 aa10.39□□□□□ -0.75
SHPRH-208ENST00000520752 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 NBPF11Q86T75 865 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.38□□□□□ -0.75
SHPRH-208ENST00000520752 VTI1AQ96AJ9 217 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 C22orf23Q9BZE7 217 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 MTMR7Q9Y216 660 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 KNSTRNQ9Y448 316 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
SHPRH-208ENST00000520752 UNC13AQ9UPW8 1703 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 CUX1P39880 1505 aa10.38□□□□□ -0.75
SHPRH-208ENST00000520752 LOC102724159A0A0B4J2E5 919 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 RTEL1-TNFRSF6BF6WH68 1400 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 DHX16O60231 1041 aaKnown RBP10.37□□□□□ -0.75
SHPRH-208ENST00000520752 U2AF2P26368 475 aaKnown RBP eCLIP10.37□□□□□ -0.75
SHPRH-208ENST00000520752 SSR1P43307 286 aaKnown RBP10.37□□□□□ -0.75
SHPRH-208ENST00000520752 PHKA2P46019 1235 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 PLA2G4AP47712 749 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 TRDNQ13061 729 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 NAIPQ13075 1403 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 PWP2Q15269 919 aaKnown RBP10.37□□□□□ -0.75
SHPRH-208ENST00000520752 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 SKAP1Q86WV1 359 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 CERS3Q8IU89 383 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 FAM184AQ8NB25 1140 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 MED4Q9NPJ6 270 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 ZDHHC3Q9NYG2 299 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 PARP3Q9Y6F1 533 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 PLEKHH1Q9ULM0 1364 aa10.37□□□□□ -0.75
SHPRH-208ENST00000520752 THOC2Q8NI27 1593 aaKnown RBP10.36□□□□□ -0.75
SHPRH-208ENST00000520752 TTC36A6NLP5 189 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 PLIN1O60240 522 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 RHOQP17081 205 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 CASQ1P31415 396 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 CYP2C19P33261 490 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 SCNN1AP37088 669 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 NBPF9Q3BBW0 867 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 SH3PXD2AQ5TCZ1 1133 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 LRSAM1Q6UWE0 723 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 CAPN12Q6ZSI9 719 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 CCDC91Q7Z6B0 441 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 TXLNBQ8N3L3 684 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 MKNK1Q9BUB5 465 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 RBSNQ9H1K0 784 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 TIMMDC1Q9NPL8 285 aa10.36□□□□□ -0.75
SHPRH-208ENST00000520752 CWC15Q9P013 229 aaKnown RBP10.36□□□□□ -0.75
SHPRH-208ENST00000520752 A0A1B0GTH6 734 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 NUCB2P80303 420 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 MAP2K1Q02750 393 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-208ENST00000520752 ZSCAN23Q3MJ62 389 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 NOM1Q5C9Z4 860 aaKnown RBP10.35□□□□□ -0.75
SHPRH-208ENST00000520752 ALDH16A1Q8IZ83 802 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 C7orf43Q8WVR3 580 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 SEPT3Q9UH03 358 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 RSPH14Q9UHP6 348 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 HCN4Q9Y3Q4 1203 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 DYRK1BQ9Y463 629 aa10.35□□□□□ -0.75
SHPRH-208ENST00000520752 RPRD2Q5VT52 1461 aaKnown RBP10.35□□□□□ -0.75
SHPRH-208ENST00000520752 GCC2Q8IWJ2 1684 aa10.34□□□□□ -0.75
SHPRH-208ENST00000520752 TOP2BQ02880 1626 aa10.34□□□□□ -0.75
SHPRH-208ENST00000520752 TXLNAP40222 546 aa10.34□□□□□ -0.75
SHPRH-208ENST00000520752 C20orf194Q5TEA3 1177 aa10.34□□□□□ -0.75
SHPRH-208ENST00000520752 AIDAQ96BJ3 306 aa10.34□□□□□ -0.75
SHPRH-208ENST00000520752 MYO19Q96H55 970 aa10.34□□□□□ -0.75
SHPRH-208ENST00000520752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHPRH-208ENST00000520752 PARD3Q8TEW0 1356 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms