RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 RBM43Q6ZSC3 357 aaKnown RBP13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 DRC7Q8IY82 874 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 ZNF609O15014 1411 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 ALS2Q96Q42 1657 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 GTF2F1P35269 517 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 DHX32Q7L7V1 743 aaKnown RBP13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 LRP10Q7Z4F1 713 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 CTAGE5O15320 804 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 AP5Z1O43299 807 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 COL9A3Q14050 684 aaPredicted RBP13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 LMBR1LQ6UX01 489 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 DSCC1Q9BVC3 393 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
NUDCD1-203ENST00000519607 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
NUDCD1-203ENST00000519607 JAK2O60674 1132 aa13.35□□□□□ -0.27
NUDCD1-203ENST00000519607 PFKFB2O60825 505 aa13.35□□□□□ -0.27
NUDCD1-203ENST00000519607 RESTQ13127 1097 aa13.35□□□□□ -0.27
NUDCD1-203ENST00000519607 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
NUDCD1-203ENST00000519607 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
NUDCD1-203ENST00000519607 CBX8Q9HC52 389 aa13.35□□□□□ -0.27
NUDCD1-203ENST00000519607 ZNF165P49910 485 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 SMARCC2Q8TAQ2 1214 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 DDX11Q96FC9 970 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 PAG1Q9NWQ8 432 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 MEGF6O75095 1541 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 NR1I2O75469 434 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 ATF3P18847 181 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 IL15P40933 162 aaPredicted RBP13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 SCRN1Q12765 414 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 TDRD7Q8NHU6 1098 aaKnown RBP13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 SEC62Q99442 399 aaKnown RBP13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 LAMB4A4D0S4 1761 aa13.34□□□□□ -0.27
NUDCD1-203ENST00000519607 GOLGA6L19H0YKK7 550 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 C17orf53Q8N3J3 647 aaPredicted RBP13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 PGBD1Q96JS3 809 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 KCNF1Q9H3M0 494 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 CWC25Q9NXE8 425 aaPredicted RBP13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 H7C1W4 665 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 GOLIM4O00461 696 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 CYP27B1O15528 508 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 CASP7P55210 303 aa13.33□□□□□ -0.28
NUDCD1-203ENST00000519607 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
NUDCD1-203ENST00000519607 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
NUDCD1-203ENST00000519607 PTGS1P23219 599 aa13.32□□□□□ -0.28
NUDCD1-203ENST00000519607 ZNF75DP51815 510 aa13.32□□□□□ -0.28
NUDCD1-203ENST00000519607 FOXO4P98177 505 aa13.32□□□□□ -0.28
NUDCD1-203ENST00000519607 PYCARDQ9ULZ3 195 aa13.32□□□□□ -0.28
NUDCD1-203ENST00000519607 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 ZMYM1Q5SVZ6 1142 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 CCDC186Q7Z3E2 898 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 PLA2G4DQ86XP0 818 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 NSUN7Q8NE18 718 aaKnown RBP13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 ZNF274Q96GC6 653 aaPredicted RBP13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 LRRC2Q9BYS8 371 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 ATG3Q9NT62 314 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 RCOR1Q9UKL0 485 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 COL18A1P39060 1754 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
NUDCD1-203ENST00000519607 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 AGXT2Q9BYV1 514 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 NAP1L2Q9ULW6 460 aaPredicted RBP13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 RNF113AO15541 343 aaKnown RBP13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 HSPD1P10809 573 aaKnown RBP13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 EXOSC10Q01780 885 aaKnown RBP13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 STX1AQ16623 288 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 STOX1Q6ZVD7 989 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 ATG9AQ7Z3C6 839 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 CCAR1Q8IX12 1150 aaKnown RBP13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 CTNNA3Q9UI47 895 aa13.3□□□□□ -0.28
NUDCD1-203ENST00000519607 E7EWF7 191 aa13.29□□□□□ -0.28
NUDCD1-203ENST00000519607 EYA2O00167 538 aa13.29□□□□□ -0.28
NUDCD1-203ENST00000519607 CIAO1O76071 339 aa13.29□□□□□ -0.28
NUDCD1-203ENST00000519607 CDC25BP30305 580 aa13.29□□□□□ -0.28
NUDCD1-203ENST00000519607 TIMM10P62072 90 aa13.29□□□□□ -0.28
NUDCD1-203ENST00000519607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
NUDCD1-203ENST00000519607 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
NUDCD1-203ENST00000519607 BECN2A8MW95 431 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms