RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 LRFN2Q9ULH4 789 aa6.72□□□□□ -1.33
CSMD3-209ENST00000519485 MMP20O60882 483 aa6.71□□□□□ -1.34
CSMD3-209ENST00000519485 COBLO75128 1261 aa6.71□□□□□ -1.34
CSMD3-209ENST00000519485 UVSSAQ2YD98 709 aa6.71□□□□□ -1.34
CSMD3-209ENST00000519485 GDF6Q6KF10 455 aaPredicted RBP6.71□□□□□ -1.34
CSMD3-209ENST00000519485 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.34
CSMD3-209ENST00000519485 J3QW42 95 aa6.7□□□□□ -1.34
CSMD3-209ENST00000519485 IRAK1P51617 712 aa6.7□□□□□ -1.34
CSMD3-209ENST00000519485 PROSER2Q86WR7 435 aaPredicted RBP6.7□□□□□ -1.34
CSMD3-209ENST00000519485 TREML1Q86YW5 311 aa6.7□□□□□ -1.34
CSMD3-209ENST00000519485 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
CSMD3-209ENST00000519485 TM4SF5O14894 197 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 DHX15O43143 795 aaKnown RBP6.69□□□□□ -1.34
CSMD3-209ENST00000519485 LGR5O75473 907 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 MED26O95402 600 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 NLRP13Q86W25 1043 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 RGL4Q8IZJ4 473 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 CMTR1Q8N1G2 835 aaKnown RBP6.69□□□□□ -1.34
CSMD3-209ENST00000519485 NSUN5Q96P11 429 aaKnown RBP6.69□□□□□ -1.34
CSMD3-209ENST00000519485 UBL7Q96S82 380 aaPredicted RBP6.69□□□□□ -1.34
CSMD3-209ENST00000519485 CEP41Q9BYV8 373 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 STOML1Q9UBI4 398 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 PPME1Q9Y570 386 aa6.69□□□□□ -1.34
CSMD3-209ENST00000519485 GLB1P16278 677 aa6.68□□□□□ -1.34
CSMD3-209ENST00000519485 YBX3P16989 372 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSMD3-209ENST00000519485 SPINK2P20155 84 aa6.68□□□□□ -1.34
CSMD3-209ENST00000519485 GP2P55259 537 aaKnown RBP6.68□□□□□ -1.34
CSMD3-209ENST00000519485 INTS5Q6P9B9 1019 aaKnown RBP6.68□□□□□ -1.34
CSMD3-209ENST00000519485 ZDHHC13Q8IUH4 622 aa6.68□□□□□ -1.34
CSMD3-209ENST00000519485 ARMC10Q8N2F6 343 aa6.68□□□□□ -1.34
CSMD3-209ENST00000519485 TRIM33Q9UPN9 1127 aa6.68□□□□□ -1.34
CSMD3-209ENST00000519485 USP20Q9Y2K6 914 aa6.68□□□□□ -1.34
CSMD3-209ENST00000519485 OAS3Q9Y6K5 1087 aaKnown RBP6.68□□□□□ -1.34
CSMD3-209ENST00000519485 COX20Q5RI15 118 aa6.67□□□□□ -1.34
CSMD3-209ENST00000519485 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.34
CSMD3-209ENST00000519485 GALNT11Q8NCW6 608 aa6.67□□□□□ -1.34
CSMD3-209ENST00000519485 OR13H1Q8NG92 308 aa6.67□□□□□ -1.34
CSMD3-209ENST00000519485 TGFB1P01137 390 aa6.66□□□□□ -1.34
CSMD3-209ENST00000519485 NFIAQ12857 509 aa6.66□□□□□ -1.34
CSMD3-209ENST00000519485 TRIP4Q15650 581 aaPredicted RBP6.66□□□□□ -1.34
CSMD3-209ENST00000519485 COL26A1Q96A83 441 aa6.66□□□□□ -1.34
CSMD3-209ENST00000519485 FAM46AQ96IP4 442 aaKnown RBP6.66□□□□□ -1.34
CSMD3-209ENST00000519485 CALR3Q96L12 384 aaKnown RBP6.66□□□□□ -1.34
CSMD3-209ENST00000519485 TAL1P17542 331 aaPredicted RBP6.65□□□□□ -1.34
CSMD3-209ENST00000519485 CD68P34810 354 aaPredicted RBP6.65□□□□□ -1.34
CSMD3-209ENST00000519485 GRIK1P39086 918 aa6.65□□□□□ -1.34
CSMD3-209ENST00000519485 RNF43Q68DV7 783 aa6.65□□□□□ -1.34
CSMD3-209ENST00000519485 DTX1Q86Y01 620 aa6.65□□□□□ -1.34
CSMD3-209ENST00000519485 KLHL23Q8NBE8 558 aa6.65□□□□□ -1.34
CSMD3-209ENST00000519485 FAM200AQ8TCP9 573 aa6.65□□□□□ -1.34
CSMD3-209ENST00000519485 CLUAP1Q96AJ1 413 aa6.65□□□□□ -1.34
CSMD3-209ENST00000519485 WISP1O95388 367 aa6.64□□□□□ -1.35
CSMD3-209ENST00000519485 BRD2P25440 801 aaKnown RBP6.64□□□□□ -1.35
CSMD3-209ENST00000519485 LMOD1P29536 600 aaPredicted RBP6.64□□□□□ -1.35
CSMD3-209ENST00000519485 FKBP5Q13451 457 aaPredicted RBP6.64□□□□□ -1.35
CSMD3-209ENST00000519485 SWI5Q1ZZU3 235 aa6.64□□□□□ -1.35
CSMD3-209ENST00000519485 ETFBKMTQ8IXQ9 262 aa6.64□□□□□ -1.35
CSMD3-209ENST00000519485 MYRFLQ96LU7 910 aa6.64□□□□□ -1.35
CSMD3-209ENST00000519485 DBNDD2Q9BQY9 259 aa6.64□□□□□ -1.35
CSMD3-209ENST00000519485 FAM13BQ9NYF5 915 aa6.64□□□□□ -1.35
CSMD3-209ENST00000519485 PRR19A6NJB7 356 aa6.63□□□□□ -1.35
CSMD3-209ENST00000519485 LINC01387J3KSC0 135 aa6.63□□□□□ -1.35
CSMD3-209ENST00000519485 KIF4AO95239 1232 aa6.63□□□□□ -1.35
CSMD3-209ENST00000519485 HYAL2Q12891 473 aa6.63□□□□□ -1.35
CSMD3-209ENST00000519485 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
CSMD3-209ENST00000519485 UTP4Q969X6 686 aaKnown RBP6.63□□□□□ -1.35
CSMD3-209ENST00000519485 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
CSMD3-209ENST00000519485 A6NJR5 290 aa6.62□□□□□ -1.35
CSMD3-209ENST00000519485 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
CSMD3-209ENST00000519485 CDC27P30260 824 aa6.62□□□□□ -1.35
CSMD3-209ENST00000519485 ACAD11Q709F0 780 aa6.62□□□□□ -1.35
CSMD3-209ENST00000519485 KCNK4Q9NYG8 393 aa6.62□□□□□ -1.35
CSMD3-209ENST00000519485 ACIN1Q9UKV3 1341 aaKnown RBP6.61□□□□□ -1.35
CSMD3-209ENST00000519485 FSCN2O14926 492 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 ADAMTS4O75173 837 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 OCLNQ16625 522 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 CFAP70Q5T0N1 1121 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 COL13A1Q5TAT6 717 aaPredicted RBP6.61□□□□□ -1.35
CSMD3-209ENST00000519485 C16orf46Q6P387 395 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 CLEC10AQ8IUN9 316 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 PIK3R5Q8WYR1 880 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 SPACA7Q96KW9 195 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
CSMD3-209ENST00000519485 UBAP1LF5GYI3 381 aa6.6□□□□□ -1.35
CSMD3-209ENST00000519485 ATP11AP98196 1134 aa6.6□□□□□ -1.35
CSMD3-209ENST00000519485 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
CSMD3-209ENST00000519485 FAM20CQ8IXL6 584 aa6.6□□□□□ -1.35
CSMD3-209ENST00000519485 WNT8BQ93098 351 aa6.6□□□□□ -1.35
CSMD3-209ENST00000519485 ADAM19Q9H013 955 aa6.6□□□□□ -1.35
CSMD3-209ENST00000519485 FNDC3AQ9Y2H6 1198 aaKnown RBP6.6□□□□□ -1.35
CSMD3-209ENST00000519485 HIF3AQ9Y2N7 669 aa6.6□□□□□ -1.35
CSMD3-209ENST00000519485 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
CSMD3-209ENST00000519485 HMX2A2RU54 273 aa6.59□□□□□ -1.35
CSMD3-209ENST00000519485 TNFRSF10BO14763 440 aa6.59□□□□□ -1.35
CSMD3-209ENST00000519485 WNT11O96014 354 aa6.59□□□□□ -1.35
CSMD3-209ENST00000519485 ELOAQ14241 798 aaKnown RBP6.59□□□□□ -1.35
CSMD3-209ENST00000519485 DUOXA2Q1HG44 320 aa6.59□□□□□ -1.35
CSMD3-209ENST00000519485 CEP135Q66GS9 1140 aa6.59□□□□□ -1.35
CSMD3-209ENST00000519485 ANKRD34AQ69YU3 496 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms