RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 CLUAP1Q96AJ1 413 aa6.36□□□□□ -1.39
PCM1-208ENST00000518877 CALR3Q96L12 384 aaKnown RBP6.36□□□□□ -1.39
PCM1-208ENST00000518877 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
PCM1-208ENST00000518877 WEE1P30291 646 aa6.35□□□□□ -1.39
PCM1-208ENST00000518877 STOML1Q9UBI4 398 aa6.35□□□□□ -1.39
PCM1-208ENST00000518877 LRFN2Q9ULH4 789 aa6.35□□□□□ -1.39
PCM1-208ENST00000518877 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
PCM1-208ENST00000518877 COBLO75128 1261 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 TGFB1P01137 390 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 SOX18P35713 384 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 MUC3BQ9H195 1237 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 PPME1Q9Y570 386 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 KCNMB2Q9Y691 235 aa6.34□□□□□ -1.39
PCM1-208ENST00000518877 DHX15O43143 795 aaKnown RBP6.33□□□□□ -1.4
PCM1-208ENST00000518877 Q6ZS46 218 aa6.33□□□□□ -1.4
PCM1-208ENST00000518877 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.33□□□□□ -1.4
PCM1-208ENST00000518877 CACTIN-AS1Q8N1I8 211 aa6.33□□□□□ -1.4
PCM1-208ENST00000518877 FNBP4Q8N3X1 1017 aaPredicted RBP6.33□□□□□ -1.4
PCM1-208ENST00000518877 FAM200AQ8TCP9 573 aa6.33□□□□□ -1.4
PCM1-208ENST00000518877 ARXQ96QS3 562 aa6.33□□□□□ -1.4
PCM1-208ENST00000518877 CEP41Q9BYV8 373 aa6.33□□□□□ -1.4
PCM1-208ENST00000518877 LINC01387J3KSC0 135 aa6.32□□□□□ -1.4
PCM1-208ENST00000518877 GP2P55259 537 aaKnown RBP6.32□□□□□ -1.4
PCM1-208ENST00000518877 TXNDC11Q6PKC3 985 aa6.32□□□□□ -1.4
PCM1-208ENST00000518877 ACAD11Q709F0 780 aa6.32□□□□□ -1.4
PCM1-208ENST00000518877 SPACA7Q96KW9 195 aa6.32□□□□□ -1.4
PCM1-208ENST00000518877 UBL7Q96S82 380 aaPredicted RBP6.32□□□□□ -1.4
PCM1-208ENST00000518877 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
PCM1-208ENST00000518877 MED26O95402 600 aa6.31□□□□□ -1.4
PCM1-208ENST00000518877 HOXD8P13378 290 aaPredicted RBP6.31□□□□□ -1.4
PCM1-208ENST00000518877 TAL1P17542 331 aaPredicted RBP6.31□□□□□ -1.4
PCM1-208ENST00000518877 CDC25BP30305 580 aa6.31□□□□□ -1.4
PCM1-208ENST00000518877 GRIK1P39086 918 aa6.31□□□□□ -1.4
PCM1-208ENST00000518877 COX20Q5RI15 118 aa6.31□□□□□ -1.4
PCM1-208ENST00000518877 NLRP13Q86W25 1043 aa6.31□□□□□ -1.4
PCM1-208ENST00000518877 GALNT11Q8NCW6 608 aa6.31□□□□□ -1.4
PCM1-208ENST00000518877 UTP4Q969X6 686 aaKnown RBP6.31□□□□□ -1.4
PCM1-208ENST00000518877 OAS3Q9Y6K5 1087 aaKnown RBP6.31□□□□□ -1.4
PCM1-208ENST00000518877 KIAA1324LA8MWY0 1029 aaPredicted RBP6.3□□□□□ -1.4
PCM1-208ENST00000518877 CD68P34810 354 aaPredicted RBP6.3□□□□□ -1.4
PCM1-208ENST00000518877 NFIAQ12857 509 aa6.3□□□□□ -1.4
PCM1-208ENST00000518877 CEP135Q66GS9 1140 aa6.3□□□□□ -1.4
PCM1-208ENST00000518877 FAM177BA6PVY3 158 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 UBAP1LF5GYI3 381 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 SMNDC1O75940 238 aaKnown RBP eCLIP6.29□□□□□ -1.4
PCM1-208ENST00000518877 WISP1O95388 367 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 YBX3P16989 372 aaKnown RBP eCLIP6.29□□□□□ -1.4
PCM1-208ENST00000518877 RFX1P22670 979 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 BRD2P25440 801 aaKnown RBP6.29□□□□□ -1.4
PCM1-208ENST00000518877 ATP11AP98196 1134 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 FKBP5Q13451 457 aaPredicted RBP6.29□□□□□ -1.4
PCM1-208ENST00000518877 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 ARMC10Q8N2F6 343 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 FMNL2Q96PY5 1086 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
PCM1-208ENST00000518877 CDC27P30260 824 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 SCNN1AP37088 669 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 HYAL2Q12891 473 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 TRIP4Q15650 581 aaPredicted RBP6.28□□□□□ -1.4
PCM1-208ENST00000518877 DUOXA2Q1HG44 320 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 UVSSAQ2YD98 709 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 CDCA8Q53HL2 280 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 INTS5Q6P9B9 1019 aaKnown RBP6.28□□□□□ -1.4
PCM1-208ENST00000518877 ZDHHC13Q8IUH4 622 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 ETFBKMTQ8IXQ9 262 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 PRIMPOLQ96LW4 560 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 CARD10Q9BWT7 1032 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 FAM13BQ9NYF5 915 aa6.28□□□□□ -1.4
PCM1-208ENST00000518877 A6NJR5 290 aa6.27□□□□□ -1.41
PCM1-208ENST00000518877 COL13A1Q5TAT6 717 aaPredicted RBP6.27□□□□□ -1.41
PCM1-208ENST00000518877 TTC39BQ5VTQ0 682 aaPredicted RBP6.27□□□□□ -1.41
PCM1-208ENST00000518877 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
PCM1-208ENST00000518877 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
PCM1-208ENST00000518877 PIK3R5Q8WYR1 880 aa6.27□□□□□ -1.41
PCM1-208ENST00000518877 DBNDD2Q9BQY9 259 aa6.27□□□□□ -1.41
PCM1-208ENST00000518877 C7orf69Q9H7B7 122 aa6.27□□□□□ -1.41
PCM1-208ENST00000518877 KCNK4Q9NYG8 393 aa6.27□□□□□ -1.41
PCM1-208ENST00000518877 NOVA2Q9UNW9 492 aaKnown RBP6.27□□□□□ -1.41
PCM1-208ENST00000518877 HMX2A2RU54 273 aa6.26□□□□□ -1.41
PCM1-208ENST00000518877 SART1O43290 800 aaKnown RBP6.26□□□□□ -1.41
PCM1-208ENST00000518877 PRMT3O60678 531 aa6.26□□□□□ -1.41
PCM1-208ENST00000518877 RNF43Q68DV7 783 aa6.26□□□□□ -1.41
PCM1-208ENST00000518877 C16orf46Q6P387 395 aa6.26□□□□□ -1.41
PCM1-208ENST00000518877 KLHL23Q8NBE8 558 aa6.26□□□□□ -1.41
PCM1-208ENST00000518877 RASSF4Q9H2L5 321 aa6.26□□□□□ -1.41
PCM1-208ENST00000518877 KCNF1Q9H3M0 494 aa6.26□□□□□ -1.41
PCM1-208ENST00000518877 FNDC3AQ9Y2H6 1198 aaKnown RBP6.26□□□□□ -1.41
PCM1-208ENST00000518877 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
PCM1-208ENST00000518877 FSCN2O14926 492 aa6.25□□□□□ -1.41
PCM1-208ENST00000518877 SPINK2P20155 84 aa6.25□□□□□ -1.41
PCM1-208ENST00000518877 TMEM132AQ24JP5 1023 aa6.25□□□□□ -1.41
PCM1-208ENST00000518877 FAM46AQ96IP4 442 aaKnown RBP6.25□□□□□ -1.41
PCM1-208ENST00000518877 MYRFLQ96LU7 910 aa6.25□□□□□ -1.41
PCM1-208ENST00000518877 SAP130Q9H0E3 1048 aa6.25□□□□□ -1.41
PCM1-208ENST00000518877 WNT11O96014 354 aa6.24□□□□□ -1.41
PCM1-208ENST00000518877 KIAA1211Q6ZU35 1233 aa6.24□□□□□ -1.41
PCM1-208ENST00000518877 NCAPG2Q86XI2 1143 aa6.24□□□□□ -1.41
PCM1-208ENST00000518877 UBASH3BQ8TF42 649 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms